RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 RPA4Q13156 261 aa14.4□□□□□ -0.1
CDK5RAP3-201ENST00000338399 CCSMST1Q4G0I0 132 aa14.4□□□□□ -0.1
CDK5RAP3-201ENST00000338399 CDKL4Q5MAI5 379 aa14.4□□□□□ -0.1
CDK5RAP3-201ENST00000338399 METRNLQ641Q3 311 aa14.4□□□□□ -0.1
CDK5RAP3-201ENST00000338399 MAVSQ7Z434 540 aa14.4□□□□□ -0.1
CDK5RAP3-201ENST00000338399 ABI3BPQ7Z7G0 1075 aa14.4□□□□□ -0.1
CDK5RAP3-201ENST00000338399 PDXPQ96GD0 296 aa14.4□□□□□ -0.1
CDK5RAP3-201ENST00000338399 TIMM29Q9BSF4 260 aa14.4□□□□□ -0.1
CDK5RAP3-201ENST00000338399 HGH1Q9BTY7 390 aa14.4□□□□□ -0.1
CDK5RAP3-201ENST00000338399 CD244Q9BZW8 370 aa14.4□□□□□ -0.1
CDK5RAP3-201ENST00000338399 MID1IP1Q9NPA3 183 aa14.4□□□□□ -0.1
CDK5RAP3-201ENST00000338399 KCNK4Q9NYG8 393 aa14.4□□□□□ -0.1
CDK5RAP3-201ENST00000338399 DLGAP2Q9P1A6 1054 aa14.4□□□□□ -0.1
CDK5RAP3-201ENST00000338399 CIDEBQ9UHD4 219 aa14.4□□□□□ -0.1
CDK5RAP3-201ENST00000338399 KCNK6Q9Y257 313 aa14.4□□□□□ -0.1
CDK5RAP3-201ENST00000338399 FIS1Q9Y3D6 152 aa14.4□□□□□ -0.1
CDK5RAP3-201ENST00000338399 PLXND1Q9Y4D7 1925 aa14.39□□□□□ -0.11
CDK5RAP3-201ENST00000338399 KLHL33A6NCF5 533 aa14.39□□□□□ -0.11
CDK5RAP3-201ENST00000338399 ZNF195O14628 629 aa14.39□□□□□ -0.11
CDK5RAP3-201ENST00000338399 HGSO14964 777 aaPredicted RBP14.39□□□□□ -0.11
CDK5RAP3-201ENST00000338399 AXIN1O15169 862 aa14.39□□□□□ -0.11
CDK5RAP3-201ENST00000338399 CCNT2O60583 730 aaKnown RBP14.39□□□□□ -0.11
CDK5RAP3-201ENST00000338399 RPL10P27635 214 aaKnown RBP14.39□□□□□ -0.11
CDK5RAP3-201ENST00000338399 ACADLP28330 430 aa14.39□□□□□ -0.11
CDK5RAP3-201ENST00000338399 AP1S2P56377 157 aa14.39□□□□□ -0.11
CDK5RAP3-201ENST00000338399 NAA20P61599 178 aa14.39□□□□□ -0.11
CDK5RAP3-201ENST00000338399 LCP2Q13094 533 aa14.39□□□□□ -0.11
CDK5RAP3-201ENST00000338399 FAM219BQ5XKK7 198 aa14.39□□□□□ -0.11
CDK5RAP3-201ENST00000338399 RD3Q7Z3Z2 195 aa14.39□□□□□ -0.11
CDK5RAP3-201ENST00000338399 OR13H1Q8NG92 308 aa14.39□□□□□ -0.11
CDK5RAP3-201ENST00000338399 UBTD2Q8WUN7 234 aa14.39□□□□□ -0.11
CDK5RAP3-201ENST00000338399 EDAQ92838 391 aa14.39□□□□□ -0.11
CDK5RAP3-201ENST00000338399 TSACCQ96A04 125 aaPredicted RBP14.39□□□□□ -0.11
CDK5RAP3-201ENST00000338399 UHRF1Q96T88 793 aaPredicted RBP14.39□□□□□ -0.11
CDK5RAP3-201ENST00000338399 EBF4Q9BQW3 602 aa14.39□□□□□ -0.11
CDK5RAP3-201ENST00000338399 ORAI3Q9BRQ5 295 aa14.39□□□□□ -0.11
CDK5RAP3-201ENST00000338399 IER2Q9BTL4 223 aa14.39□□□□□ -0.11
CDK5RAP3-201ENST00000338399 ZDHHC5Q9C0B5 715 aa14.39□□□□□ -0.11
CDK5RAP3-201ENST00000338399 OSGEPL1Q9H4B0 414 aa14.39□□□□□ -0.11
CDK5RAP3-201ENST00000338399 A0A1B0GTL3 188 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 MATN2O00339 956 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 C1orf105O95561 183 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 ALOX15P16050 662 aaPredicted RBP14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 NUDT1P36639 197 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 RABIFP47224 123 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 DMPKQ09013 629 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 DMWDQ09019 674 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 IFT88Q13099 833 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 GTF2H2Q13888 395 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 RBBP7Q16576 425 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 ZXDCQ2QGD7 858 aaPredicted RBP14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 VWA5B1Q5TIE3 1220 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 GTF2H2CQ6P1K8 395 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 GOLGA7Q7Z5G4 137 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 PDZD3Q86UT5 571 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 MAPK15Q8TD08 544 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 PLCD4Q9BRC7 762 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 SIKE1Q9BRV8 207 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 WWP1Q9H0M0 922 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 OPTCQ9UBM4 332 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 KLQ9UEF7 1012 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 PNMA8BQ9ULN7 279 aaPredicted RBP14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 SLCO1B1Q9Y6L6 691 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 CACNA1IQ9P0X4 2223 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 ABCA7Q8IZY2 2146 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 METTL12A8MUP2 240 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 TOR1BO14657 336 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 HDAC3O15379 428 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 STK16O75716 305 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 PRDX3P30048 256 aaKnown RBP14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 MAGEA9P43362 315 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 HNMTP50135 292 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 CLCNKAP51800 687 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 RPL6Q02878 288 aaKnown RBP14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 CLEC6AQ6EIG7 209 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 C6orf89Q6UWU4 347 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 SLC22A18ASQ8N1D0 253 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 TCAIMQ8N3R3 496 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 TEX9Q8N6V9 391 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 AGAP11Q8TF27 550 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 FBXL8Q96CD0 374 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 SPACA7Q96KW9 195 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 PPP1R36Q96LQ0 422 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 CCDC138Q96M89 665 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 SLC6A18Q96N87 628 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 OR2M4Q96R27 311 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 PKP4Q99569 1192 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 ATG10Q9H0Y0 220 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 NOL11Q9H8H0 719 aaKnown RBP14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 SPATA6Q9NWH7 488 aaPredicted RBP14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 HEY2Q9UBP5 337 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 VTI1BQ9UEU0 232 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 ACSL5Q9ULC5 683 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 ASF1AQ9Y294 204 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 TRAF6Q9Y4K3 522 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 ST14Q9Y5Y6 855 aa14.38□□□□□ -0.11
CDK5RAP3-201ENST00000338399 LRP4O75096 1905 aa14.37□□□□□ -0.11
CDK5RAP3-201ENST00000338399 SLCO1B7G3V0H7 640 aa14.37□□□□□ -0.11
CDK5RAP3-201ENST00000338399 K7EPI3 171 aa14.37□□□□□ -0.11
CDK5RAP3-201ENST00000338399 TNFRSF10CO14798 259 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms