RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 C16orf46Q6P387 395 aa10.89□□□□□ -0.67
C9orf85-201ENST00000334731 ZNF534Q76KX8 674 aa10.89□□□□□ -0.67
C9orf85-201ENST00000334731 NLRP9Q7RTR0 991 aa10.89□□□□□ -0.67
C9orf85-201ENST00000334731 OR52E1Q8NGJ3 308 aa10.89□□□□□ -0.67
C9orf85-201ENST00000334731 OR4L1Q8NH43 312 aa10.89□□□□□ -0.67
C9orf85-201ENST00000334731 ELMO1Q92556 727 aa10.89□□□□□ -0.67
C9orf85-201ENST00000334731 PEX13Q92968 403 aa10.89□□□□□ -0.67
C9orf85-201ENST00000334731 ZNF501Q96CX3 271 aaPredicted RBP10.89□□□□□ -0.67
C9orf85-201ENST00000334731 SGSM3Q96HU1 749 aa10.89□□□□□ -0.67
C9orf85-201ENST00000334731 TUBB2BQ9BVA1 445 aa10.89□□□□□ -0.67
C9orf85-201ENST00000334731 FAM117AQ9C073 453 aa10.89□□□□□ -0.67
C9orf85-201ENST00000334731 SLC25A18Q9H1K4 315 aa10.89□□□□□ -0.67
C9orf85-201ENST00000334731 LHX9Q9NQ69 397 aa10.89□□□□□ -0.67
C9orf85-201ENST00000334731 C1GALT1Q9NS00 363 aa10.89□□□□□ -0.67
C9orf85-201ENST00000334731 KCND1Q9NSA2 647 aa10.89□□□□□ -0.67
C9orf85-201ENST00000334731 KCND3Q9UK17 655 aa10.89□□□□□ -0.67
C9orf85-201ENST00000334731 PRDM4Q9UKN5 801 aa10.89□□□□□ -0.67
C9orf85-201ENST00000334731 POMT2Q9UKY4 750 aa10.89□□□□□ -0.67
C9orf85-201ENST00000334731 BTRCQ9Y297 605 aa10.89□□□□□ -0.67
C9orf85-201ENST00000334731 ZKSCAN5Q9Y2L8 839 aa10.89□□□□□ -0.67
C9orf85-201ENST00000334731 TCAF1Q9Y4C2 921 aa10.89□□□□□ -0.67
C9orf85-201ENST00000334731 PCDHGA6Q9Y5G7 932 aa10.89□□□□□ -0.67
C9orf85-201ENST00000334731 COL6A6A6NMZ7 2263 aa10.89□□□□□ -0.67
C9orf85-201ENST00000334731 TLN1Q9Y490 2541 aaKnown RBP10.88□□□□□ -0.67
C9orf85-201ENST00000334731 SLC5A10A0PJK1 596 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 GSAPA4D1B5 854 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 BTN3A1O00481 513 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 SLC28A2O43868 658 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 KATNA1O75449 491 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 FTH1P02794 183 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 OR56A5P0C7T3 313 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 CDH3P22223 829 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 KCNJ1P48048 391 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 NFKB2Q00653 900 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 KCNAB2Q13303 367 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 SEMA3AQ14563 771 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 BRD3Q15059 726 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 PCID2Q5JVF3 399 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 TMTC4Q5T4D3 741 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 AFTPHQ6ULP2 937 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 NAPRTQ6XQN6 538 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 AMIGO1Q86WK6 493 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 ADGRF3Q8IZF5 1079 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 TRIM58Q8NG06 486 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 OR6P1Q8NGX9 317 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 OR8K5Q8NH50 307 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 CT55Q8WUE5 264 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 APOBEC4Q8WW27 367 aaKnown RBP10.88□□□□□ -0.67
C9orf85-201ENST00000334731 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.88□□□□□ -0.67
C9orf85-201ENST00000334731 TTC1Q99614 292 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 HGH1Q9BTY7 390 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 PITPNM3Q9BZ71 974 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 ZNF106Q9H2Y7 1883 aaKnown RBP10.88□□□□□ -0.67
C9orf85-201ENST00000334731 XKR8Q9H6D3 395 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 EIF2B3Q9NR50 452 aaKnown RBP10.88□□□□□ -0.67
C9orf85-201ENST00000334731 CHRAC1Q9NRG0 131 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 SOHLH2Q9NX45 425 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 TUBD1Q9UJT1 453 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 PCDHB3Q9Y5E6 796 aa10.88□□□□□ -0.67
C9orf85-201ENST00000334731 C2orf74A8MZ97 194 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 C21orf140B9A014 251 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 SUV39H1O43463 412 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 CEP104O60308 925 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 SCRG1O75711 98 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 ZIC2O95409 532 aaPredicted RBP10.87□□□□□ -0.67
C9orf85-201ENST00000334731 RECKO95980 971 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 FURINP09958 794 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 TPBGLP0DKB5 382 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 ST6GAL1P15907 406 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 CXCR5P32302 372 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 NPY2RP49146 381 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 SESN2P58004 480 aaPredicted RBP10.87□□□□□ -0.67
C9orf85-201ENST00000334731 PRAMEP78395 509 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 CRADDP78560 199 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 PLOD1Q02809 727 aaPredicted RBP10.87□□□□□ -0.67
C9orf85-201ENST00000334731 DNASE1L3Q13609 305 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 ERV3-1Q14264 604 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 FASTKD1Q53R41 847 aaKnown RBP10.87□□□□□ -0.67
C9orf85-201ENST00000334731 PRAMEF17Q5VTA0 474 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 FAM199XQ6PEV8 388 aaPredicted RBP10.87□□□□□ -0.67
C9orf85-201ENST00000334731 C4orf22Q6V702 233 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 UNC5AQ6ZN44 842 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 GSTA5Q7RTV2 222 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 PRICKLE2Q7Z3G6 844 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 LDB1Q86U70 411 aaPredicted RBP10.87□□□□□ -0.67
C9orf85-201ENST00000334731 TMEM126BQ8IUX1 230 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 TBC1D21Q8IYX1 336 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 SLC38A9Q8NBW4 561 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 PPHLN1Q8NEY8 458 aaKnown RBP10.87□□□□□ -0.67
C9orf85-201ENST00000334731 OR5AR1Q8NGP9 310 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 MAIP1Q8WWC4 291 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 TRAPPC9Q96Q05 1148 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 LATS2Q9NRM7 1088 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 ACTR10Q9NZ32 417 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 ICKQ9UPZ9 632 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 ASF1AQ9Y294 204 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 PPP2R2CQ9Y2T4 447 aa10.87□□□□□ -0.67
C9orf85-201ENST00000334731 HEMK1Q9Y5R4 338 aaPredicted RBP10.87□□□□□ -0.67
C9orf85-201ENST00000334731 SPTA1P02549 2419 aa10.86□□□□□ -0.67
C9orf85-201ENST00000334731 PIPSLA2A3N6 862 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms