RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 TLR4O00206 839 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 PEX11AO75192 247 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 XRCC1P18887 633 aaPredicted RBP5.44□□□□□ -1.54
PTPRB-202ENST00000334414 GSTM2P28161 218 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 ABL2P42684 1182 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 TSPAN5P62079 268 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 GTF2BQ00403 316 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 AIMP2Q13155 320 aaKnown RBP5.44□□□□□ -1.54
PTPRB-202ENST00000334414 MAPK14Q16539 360 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 SAPCD2Q86UD0 394 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 ZC3HC1Q86WB0 502 aaKnown RBP5.44□□□□□ -1.54
PTPRB-202ENST00000334414 HID1Q8IV36 788 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 IQCF2Q8IXL9 164 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 NIPA2Q8N8Q9 360 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 SSX3Q99909 188 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 SLC6A16Q9GZN6 736 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 ZNF490Q9ULM2 529 aaPredicted RBP5.44□□□□□ -1.54
PTPRB-202ENST00000334414 RFPL1O75677 317 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 PPM1BO75688 479 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 C2orf80Q0P641 193 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 CRTC2Q53ET0 693 aaPredicted RBP5.44□□□□□ -1.54
PTPRB-202ENST00000334414 ANKS1BQ7Z6G8 1248 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 SPATA20Q8TB22 786 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 COPS5Q92905 334 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 GLT1D1Q96MS3 346 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 KCNMB3Q9NPA1 279 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 CYTH4Q9UIA0 394 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 CNTNAP2Q9UHC6 1331 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 TTLL13PA6NNM8 815 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 SHOXO15266 292 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 OR10H2O60403 315 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 CYP3A5P20815 502 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 GLUD2P49448 558 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 PRMT2P55345 433 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 ACTBP60709 375 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 ACTG1P63261 375 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 ABRAXAS2Q15018 415 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 COQ5Q5HYK3 327 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 OR2T5Q6IEZ7 315 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 WDR53Q7Z5U6 358 aaPredicted RBP5.44□□□□□ -1.54
PTPRB-202ENST00000334414 ZDHHC21Q8IVQ6 265 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 TNS4Q8IZW8 715 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 CCDC54Q8NEL0 328 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 OR2T29Q8NH02 315 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 OR2L2Q8NH16 312 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 SGK2Q9HBY8 427 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 SPON1Q9HCB6 807 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 PIM2Q9P1W9 311 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 C17orf113A0A1B0GUU1 675 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 ZSCAN5BA6NJL1 495 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 CREBL2O60519 120 aaPredicted RBP5.44□□□□□ -1.54
PTPRB-202ENST00000334414 RDH16O75452 317 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 ZMPSTE24O75844 475 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 GADD45GO95257 159 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 ERCC1P07992 297 aaPredicted RBP5.44□□□□□ -1.54
PTPRB-202ENST00000334414 CBSLP0DN79 551 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 FPR1P21462 350 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 CBSP35520 551 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 OR3A3P47888 321 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 OR3A2P47893 321 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 PGM5Q15124 567 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 SLC25A52Q3SY17 297 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 ZC3H12AQ5D1E8 599 aaKnown RBP5.44□□□□□ -1.54
PTPRB-202ENST00000334414 PAQR7Q86WK9 346 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 ZNF527Q8NB42 609 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 PSD4Q8NDX1 1056 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 ARL11Q969Q4 196 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 MRM3Q9HC36 420 aaKnown RBP5.44□□□□□ -1.54
PTPRB-202ENST00000334414 ABCB9Q9NP78 766 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 CNTN3Q9P232 1028 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 SLC17A7Q9P2U7 560 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 DDX6P26196 483 aaKnown RBP eCLIP5.43□□□□□ -1.54
PTPRB-202ENST00000334414 ACVR2AP27037 513 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 MAGEA6P43360 314 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 PPP5CP53041 499 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 CEBPGP53567 150 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 DET1Q7L5Y6 550 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 ZNF627Q7L945 461 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 COMMD7Q86VX2 200 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 ZNF283Q8N7M2 679 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 TNFRSF10DQ9UBN6 386 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 RUVBL1Q9Y265 456 aaKnown RBP5.43□□□□□ -1.54
PTPRB-202ENST00000334414 FAM230AA0A1W2PPH8 454 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 GTPBP1O00178 669 aaKnown RBP5.43□□□□□ -1.54
PTPRB-202ENST00000334414 SSX4O60224 188 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 XYLBO75191 536 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 AP2A1O95782 977 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 DPP6P42658 865 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 ATXN1P54253 815 aaKnown RBP5.43□□□□□ -1.54
PTPRB-202ENST00000334414 RAB4BP61018 213 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 STXBP1P61764 594 aaKnown RBP5.43□□□□□ -1.54
PTPRB-202ENST00000334414 PRKCDQ05655 676 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 MPPE1Q53F39 396 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 ALG10Q5BKT4 473 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 COLEC12Q5KU26 742 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 METTL7BQ6UX53 244 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 HACD2Q6Y1H2 254 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 MON1BQ7L1V2 547 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 FAM83AQ86UY5 434 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 C17orf64Q86WR6 236 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms