RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 XKR8Q9H6D3 395 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 GOLGA4Q13439 2230 aaKnown RBP16.11■□□□□ 0.17
SHOX-201ENST00000334060 UBXN8O00124 270 aa16.1■□□□□ 0.17
SHOX-201ENST00000334060 NOBOXO60393 691 aa16.1■□□□□ 0.17
SHOX-201ENST00000334060 MATN4O95460 622 aa16.1■□□□□ 0.17
SHOX-201ENST00000334060 MTHFD2P13995 350 aa16.1■□□□□ 0.17
SHOX-201ENST00000334060 YBX1P67809 324 aaKnown RBP16.1■□□□□ 0.17
SHOX-201ENST00000334060 TAF1BQ53T94 588 aaPredicted RBP16.1■□□□□ 0.17
SHOX-201ENST00000334060 TECRLQ5HYJ1 363 aa16.1■□□□□ 0.17
SHOX-201ENST00000334060 CES4AQ5XG92 561 aa16.1■□□□□ 0.17
SHOX-201ENST00000334060 LRRC8EQ6NSJ5 796 aa16.1■□□□□ 0.17
SHOX-201ENST00000334060 PRR23CQ6ZRP0 262 aa16.1■□□□□ 0.17
SHOX-201ENST00000334060 KYQ8NBH2 561 aa16.1■□□□□ 0.17
SHOX-201ENST00000334060 PPFIBP2Q8ND30 876 aa16.1■□□□□ 0.17
SHOX-201ENST00000334060 FAM76AQ8TAV0 307 aa16.1■□□□□ 0.17
SHOX-201ENST00000334060 SLC37A2Q8TED4 501 aa16.1■□□□□ 0.17
SHOX-201ENST00000334060 APOPT1Q96IL0 206 aa16.1■□□□□ 0.17
SHOX-201ENST00000334060 POPDC3Q9HBV1 291 aa16.1■□□□□ 0.17
SHOX-201ENST00000334060 PDE10AQ9Y233 779 aa16.1■□□□□ 0.17
SHOX-201ENST00000334060 ASXL3Q9C0F0 2248 aa16.1■□□□□ 0.17
SHOX-201ENST00000334060 DCHS1Q96JQ0 3298 aa16.1■□□□□ 0.17
SHOX-201ENST00000334060 QSOX1O00391 747 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 MPOP05164 745 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 RETP07949 1114 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 IDSP22304 550 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 SKIV2L2P42285 1042 aaKnown RBP16.09■□□□□ 0.17
SHOX-201ENST00000334060 HNRNPKP61978 463 aaKnown RBP eCLIP16.09■□□□□ 0.17
SHOX-201ENST00000334060 UAP1L1Q3KQV9 507 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 AGBL2Q5U5Z8 902 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 ATG14Q6ZNE5 492 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 RASGRP3Q8IV61 690 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 FAM174AQ8TBP5 190 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 ASB11Q8WXH4 323 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 TFGQ92734 400 aaPredicted RBP16.09■□□□□ 0.17
SHOX-201ENST00000334060 LOXL4Q96JB6 756 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 CAMK1GQ96NX5 476 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 ATOH8Q96SQ7 321 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 DERL2Q9GZP9 239 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 KCNK9Q9NPC2 374 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 SEMA4GQ9NTN9 838 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 ASF1AQ9Y294 204 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 DNMT3AQ9Y6K1 912 aaPredicted RBP16.09■□□□□ 0.17
SHOX-201ENST00000334060 GVINP1Q7Z2Y8 2422 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 A0A087X1B8 175 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 LY6G6EA0A0G2JKS1 128 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 TMEM120BA0PK00 339 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 GOLGA6L10A6NI86 522 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 TARM1B6A8C7 271 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 COPEO14579 308 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 KHNYNO15037 678 aaKnown RBP16.09■□□□□ 0.17
SHOX-201ENST00000334060 C1orf105O95561 183 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 SLC35G4P0C7Q5 338 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 F3P13726 295 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 CCR10P46092 362 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 AGTR2P50052 363 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 COL9A2Q14055 689 aaPredicted RBP16.09■□□□□ 0.17
SHOX-201ENST00000334060 LRP8Q14114 963 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 FASTKQ14296 549 aaKnown RBP16.09■□□□□ 0.17
SHOX-201ENST00000334060 IYDQ6PHW0 289 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 UBE2R2Q712K3 238 aaPredicted RBP16.09■□□□□ 0.17
SHOX-201ENST00000334060 TAX1BP1Q86VP1 789 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 ARMC2Q8NEN0 867 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 ZDHHC1Q8WTX9 485 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 SCYL1Q96KG9 808 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 SMC6Q96SB8 1091 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 SELENOSQ9BQE4 189 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 GSDMCQ9BYG8 508 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 ERVMER34-1Q9H9K5 563 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 TDRKHQ9Y2W6 561 aaKnown RBP16.09■□□□□ 0.17
SHOX-201ENST00000334060 U3KQA8 63 aa16.09■□□□□ 0.17
SHOX-201ENST00000334060 ASCC3Q8N3C0 2202 aaKnown RBP16.08■□□□□ 0.17
SHOX-201ENST00000334060 SRRM3A6NNA2 597 aaPredicted RBP16.08■□□□□ 0.16
SHOX-201ENST00000334060 OPA1O60313 960 aa16.08■□□□□ 0.16
SHOX-201ENST00000334060 PROCP04070 461 aa16.08■□□□□ 0.16
SHOX-201ENST00000334060 HOXD12P35452 270 aa16.08■□□□□ 0.16
SHOX-201ENST00000334060 RXRGP48443 463 aa16.08■□□□□ 0.16
SHOX-201ENST00000334060 ATP1A2P50993 1020 aa16.08■□□□□ 0.16
SHOX-201ENST00000334060 WDR4P57081 412 aaKnown RBP16.08■□□□□ 0.16
SHOX-201ENST00000334060 DNAJC3Q13217 504 aa16.08■□□□□ 0.16
SHOX-201ENST00000334060 UGT3A1Q6NUS8 523 aa16.08■□□□□ 0.16
SHOX-201ENST00000334060 YTHDF3Q7Z739 585 aaKnown RBP16.08■□□□□ 0.16
SHOX-201ENST00000334060 SLC35F3Q8IY50 421 aa16.08■□□□□ 0.16
SHOX-201ENST00000334060 CNPY4Q8N129 248 aa16.08■□□□□ 0.16
SHOX-201ENST00000334060 MYO1HQ8N1T3 1032 aa16.08■□□□□ 0.16
SHOX-201ENST00000334060 CEP76Q8TAP6 659 aa16.08■□□□□ 0.16
SHOX-201ENST00000334060 DENND1AQ8TEH3 1009 aa16.08■□□□□ 0.16
SHOX-201ENST00000334060 NUSAP1Q9BXS6 441 aaKnown RBP16.08■□□□□ 0.16
SHOX-201ENST00000334060 SYTL2Q9HCH5 934 aa16.08■□□□□ 0.16
SHOX-201ENST00000334060 SPASTQ9UBP0 616 aa16.08■□□□□ 0.16
SHOX-201ENST00000334060 PCDHGA5Q9Y5G8 931 aa16.08■□□□□ 0.16
SHOX-201ENST00000334060 WDR91A4D1P6 747 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 LMO7DNF2Z398 122 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 GFYI3L273 518 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 PPM1DO15297 605 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 PLIN3O60664 434 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 PSIP1O75475 530 aaKnown RBP16.07■□□□□ 0.16
SHOX-201ENST00000334060 LMNAP02545 664 aaKnown RBP16.07■□□□□ 0.16
SHOX-201ENST00000334060 GDF5P43026 501 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 ETV4P43268 484 aa16.07■□□□□ 0.16
SHOX-201ENST00000334060 BLKP51451 505 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms