RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 CLDND1Q9NY35 253 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 STX18Q9P2W9 335 aaKnown RBP14.6□□□□□ -0.07
TPM3-205ENST00000328159 STOML1Q9UBI4 398 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 PACSIN3Q9UKS6 424 aa14.6□□□□□ -0.07
TPM3-205ENST00000328159 LAMA3Q16787 3333 aa14.59□□□□□ -0.07
TPM3-205ENST00000328159 SYNCRIPO60506 623 aaKnown RBP14.59□□□□□ -0.07
TPM3-205ENST00000328159 FKBP6O75344 327 aa14.59□□□□□ -0.07
TPM3-205ENST00000328159 PSIP1O75475 530 aaKnown RBP14.59□□□□□ -0.07
TPM3-205ENST00000328159 EPORP19235 508 aa14.59□□□□□ -0.07
TPM3-205ENST00000328159 PBLDP30039 288 aaPredicted RBP14.59□□□□□ -0.07
TPM3-205ENST00000328159 DRD3P35462 400 aa14.59□□□□□ -0.07
TPM3-205ENST00000328159 TNFRSF4P43489 277 aa14.59□□□□□ -0.07
TPM3-205ENST00000328159 ERFP50548 548 aa14.59□□□□□ -0.07
TPM3-205ENST00000328159 THOP1P52888 689 aa14.59□□□□□ -0.07
TPM3-205ENST00000328159 SLC34A1Q06495 639 aa14.59□□□□□ -0.07
TPM3-205ENST00000328159 CAMK2GQ13555 558 aaPredicted RBP14.59□□□□□ -0.07
TPM3-205ENST00000328159 CEACAM7Q14002 265 aa14.59□□□□□ -0.07
TPM3-205ENST00000328159 ZNF423Q2M1K9 1284 aa14.59□□□□□ -0.07
TPM3-205ENST00000328159 PDCD4Q53EL6 469 aaKnown RBP14.59□□□□□ -0.07
TPM3-205ENST00000328159 RNF165Q6ZSG1 346 aa14.59□□□□□ -0.07
TPM3-205ENST00000328159 HOMEZQ8IX15 550 aa14.59□□□□□ -0.07
TPM3-205ENST00000328159 TDHQ8IZJ6 230 aa14.59□□□□□ -0.07
TPM3-205ENST00000328159 LILRA3Q8N6C8 439 aaPredicted RBP14.59□□□□□ -0.07
TPM3-205ENST00000328159 ZNF513Q8N8E2 541 aaPredicted RBP14.59□□□□□ -0.07
TPM3-205ENST00000328159 FNDC5Q8NAU1 212 aa14.59□□□□□ -0.07
TPM3-205ENST00000328159 KCNV2Q8TDN2 545 aa14.59□□□□□ -0.07
TPM3-205ENST00000328159 JADE3Q92613 823 aa14.59□□□□□ -0.07
TPM3-205ENST00000328159 FBXL8Q96CD0 374 aa14.59□□□□□ -0.07
TPM3-205ENST00000328159 C1orf50Q9BV19 199 aa14.59□□□□□ -0.07
TPM3-205ENST00000328159 SLC29A3Q9BZD2 475 aa14.59□□□□□ -0.07
TPM3-205ENST00000328159 BRINP2Q9C0B6 783 aa14.59□□□□□ -0.07
TPM3-205ENST00000328159 OR2AG1Q9H205 316 aa14.59□□□□□ -0.07
TPM3-205ENST00000328159 PCDHGA7Q9Y5G6 932 aa14.59□□□□□ -0.07
TPM3-205ENST00000328159 ARHGEF33A8MVX0 844 aa14.58□□□□□ -0.08
TPM3-205ENST00000328159 MANBAO00462 879 aa14.58□□□□□ -0.08
TPM3-205ENST00000328159 FFAR3O14843 346 aa14.58□□□□□ -0.08
TPM3-205ENST00000328159 NPC1O15118 1278 aa14.58□□□□□ -0.08
TPM3-205ENST00000328159 MID1O15344 667 aa14.58□□□□□ -0.08
TPM3-205ENST00000328159 GPR42O15529 346 aa14.58□□□□□ -0.08
TPM3-205ENST00000328159 RNASEH1O60930 286 aaKnown RBP14.58□□□□□ -0.08
TPM3-205ENST00000328159 LILRB5O75023 590 aa14.58□□□□□ -0.08
TPM3-205ENST00000328159 CLDN9O95484 217 aa14.58□□□□□ -0.08
TPM3-205ENST00000328159 MAP4P27816 1152 aaKnown RBP14.58□□□□□ -0.08
TPM3-205ENST00000328159 GTF2H3Q13889 308 aa14.58□□□□□ -0.08
TPM3-205ENST00000328159 NR6A1Q15406 480 aa14.58□□□□□ -0.08
TPM3-205ENST00000328159 CST6Q15828 149 aa14.58□□□□□ -0.08
TPM3-205ENST00000328159 PTCHD3Q3KNS1 767 aa14.58□□□□□ -0.08
TPM3-205ENST00000328159 ZNF658BQ4V348 819 aaPredicted RBP14.58□□□□□ -0.08
TPM3-205ENST00000328159 WLSQ5T9L3 541 aa14.58□□□□□ -0.08
TPM3-205ENST00000328159 AAGABQ6PD74 315 aa14.58□□□□□ -0.08
TPM3-205ENST00000328159 BLOC1S3Q6QNY0 202 aa14.58□□□□□ -0.08
TPM3-205ENST00000328159 SLC22A15Q8IZD6 547 aa14.58□□□□□ -0.08
TPM3-205ENST00000328159 AADATQ8N5Z0 425 aa14.58□□□□□ -0.08
TPM3-205ENST00000328159 CSGALNACT1Q8TDX6 532 aa14.58□□□□□ -0.08
TPM3-205ENST00000328159 HBEGFQ99075 208 aa14.58□□□□□ -0.08
TPM3-205ENST00000328159 ACTR8Q9H981 624 aa14.58□□□□□ -0.08
TPM3-205ENST00000328159 TRIM39Q9HCM9 518 aa14.58□□□□□ -0.08
TPM3-205ENST00000328159 ATXN10Q9UBB4 475 aa14.58□□□□□ -0.08
TPM3-205ENST00000328159 KLQ9UEF7 1012 aa14.58□□□□□ -0.08
TPM3-205ENST00000328159 NDUFAF1Q9Y375 327 aa14.58□□□□□ -0.08
TPM3-205ENST00000328159 CCL27Q9Y4X3 112 aa14.58□□□□□ -0.08
TPM3-205ENST00000328159 KRT87PA6NCN2 255 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 K7EQS6 105 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 SLC28A1O00337 649 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 LSM1O15116 133 aaKnown RBP14.57□□□□□ -0.08
TPM3-205ENST00000328159 AP1G1O43747 822 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 ADH1BP00325 375 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 CAPN3P20807 821 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 ME2P23368 584 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 GCKP35557 465 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 LTBRP36941 435 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 MAPK9P45984 424 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 PTDSS1P48651 473 aaKnown RBP14.57□□□□□ -0.08
TPM3-205ENST00000328159 SEC13P55735 322 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 AP2B1P63010 937 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 EMX2Q04743 252 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 VPS26BQ4G0F5 336 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.57□□□□□ -0.08
TPM3-205ENST00000328159 AGBL4Q5VU57 503 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 LAYNQ6UX15 382 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 RETREG3Q86VR2 466 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 CACUL1Q86Y37 369 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 TRAPPC5Q8IUR0 188 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.57□□□□□ -0.08
TPM3-205ENST00000328159 PCYOX1LQ8NBM8 494 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 TSPEARQ8WU66 669 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 ROPN1LQ96C74 230 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 PPP3R2Q96LZ3 170 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 TACO1Q9BSH4 297 aaKnown RBP14.57□□□□□ -0.08
TPM3-205ENST00000328159 HEBP1Q9NRV9 189 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 DNAJC11Q9NVH1 559 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 LMCD1Q9NZU5 365 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 ZIM2Q9NZV7 527 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 CROTQ9UKG9 612 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 ANGPTL2Q9UKU9 493 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 C9JVG2 144 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 ANGPT2O15123 496 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 RGS14O43566 566 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 ULK1O75385 1050 aa14.57□□□□□ -0.08
TPM3-205ENST00000328159 CATP04040 527 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms