RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 MDGA1Q8NFP4 955 aa11.61□□□□□ -0.55
DDR1-223ENST00000324771 OR9Q1Q8NGQ5 310 aa11.61□□□□□ -0.55
DDR1-223ENST00000324771 SLC13A3Q8WWT9 602 aa11.61□□□□□ -0.55
DDR1-223ENST00000324771 LRRC58Q96CX6 371 aa11.61□□□□□ -0.55
DDR1-223ENST00000324771 TUBGCP5Q96RT8 1024 aa11.61□□□□□ -0.55
DDR1-223ENST00000324771 C11orf84Q9BUA3 381 aaPredicted RBP11.61□□□□□ -0.55
DDR1-223ENST00000324771 CHID1Q9BWS9 393 aa11.61□□□□□ -0.55
DDR1-223ENST00000324771 AMBNQ9NP70 447 aa11.61□□□□□ -0.55
DDR1-223ENST00000324771 DNAJC15Q9Y5T4 150 aa11.61□□□□□ -0.55
DDR1-223ENST00000324771 TRIP11Q15643 1979 aa11.61□□□□□ -0.55
DDR1-223ENST00000324771 BHMG1C9JSJ3 638 aaPredicted RBP11.6□□□□□ -0.55
DDR1-223ENST00000324771 TNK2Q07912 1038 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 GPR107Q5VW38 600 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 OR4F3Q6IEY1 312 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 ADHFE1Q8IWW8 467 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 NXPE1Q8N323 547 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 KDM1BQ8NB78 822 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 OR13J1Q8NGT2 312 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 VANGL1Q8TAA9 524 aaPredicted RBP11.6□□□□□ -0.55
DDR1-223ENST00000324771 PPCDCQ96CD2 204 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 PAIP1Q9H074 479 aaKnown RBP11.6□□□□□ -0.55
DDR1-223ENST00000324771 SOX17Q9H6I2 414 aaPredicted RBP11.6□□□□□ -0.55
DDR1-223ENST00000324771 ELAC1Q9H777 363 aaKnown RBP11.6□□□□□ -0.55
DDR1-223ENST00000324771 MARCH5Q9NX47 278 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 CORO1CQ9ULV4 474 aaPredicted RBP11.6□□□□□ -0.55
DDR1-223ENST00000324771 KRT87PA6NCN2 255 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 FPGTO14772 594 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 SNNO75324 88 aaPredicted RBP11.6□□□□□ -0.55
DDR1-223ENST00000324771 OPN1SWP03999 348 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 MANFP55145 182 aaKnown RBP11.6□□□□□ -0.55
DDR1-223ENST00000324771 ERVK-8P63133 956 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 IRF5Q13568 498 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 HKDC1Q2TB90 917 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 SYVN1Q86TM6 617 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 PGBD5Q8N414 524 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 HDDC3Q8N4P3 179 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 C10orf53Q8N6V4 93 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 OR5AK3PQ8NH89 298 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 ARRDC2Q8TBH0 407 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 NT5C3BQ969T7 300 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 TRIM45Q9H8W5 580 aaPredicted RBP11.6□□□□□ -0.55
DDR1-223ENST00000324771 DUSP12Q9UNI6 340 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 A0A088AWK7 358 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 ELOVL7A1L3X0 281 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 TNFRSF10BO14763 440 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 PAPSS2O95340 614 aaPredicted RBP11.6□□□□□ -0.55
DDR1-223ENST00000324771 OAS1P00973 400 aaKnown RBP11.6□□□□□ -0.55
DDR1-223ENST00000324771 ADH5P11766 374 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 RRM2P31350 389 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 GSK3BP49841 420 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 BNIP2Q12982 314 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 SLC5A9Q2M3M2 681 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 FAM46CQ5VWP2 391 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 PPP2R2DQ66LE6 453 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 FAM180BQ6P0A1 224 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 RFLNAQ6ZTI6 216 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 KRT78Q8N1N4 520 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 OR4A15Q8NGL6 344 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 NELL1Q92832 810 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 ITCHQ96J02 903 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 ANKRD27Q96NW4 1050 aa11.6□□□□□ -0.55
DDR1-223ENST00000324771 ZNF334Q9HCZ1 680 aaPredicted RBP11.6□□□□□ -0.55
DDR1-223ENST00000324771 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.59□□□□□ -0.55
DDR1-223ENST00000324771 WASH3PC4AMC7 463 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 EI24O14681 340 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 POP7O75817 140 aaKnown RBP11.59□□□□□ -0.55
DDR1-223ENST00000324771 GM2AP17900 193 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 C16orf72Q14CZ0 275 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 PCBP2Q15366 365 aaKnown RBP eCLIP11.59□□□□□ -0.558e-7■■■■■ 32.5
DDR1-223ENST00000324771 MAPK11Q15759 364 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 MYEOVQ96EZ4 313 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 TRAPPC9Q96Q05 1148 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 NLNQ9BYT8 704 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 OR51B5Q9H339 312 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 EXD2Q9NVH0 621 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 OAZ3Q9UMX2 235 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 HNRNPRO43390 633 aaKnown RBP11.59□□□□□ -0.55
DDR1-223ENST00000324771 GRID2O43424 1007 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 LATO43561 262 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 FBXW4P57775 412 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 RPS7P62081 194 aaKnown RBP11.59□□□□□ -0.55
DDR1-223ENST00000324771 GSTA3Q16772 222 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 C6orf136Q5SQH8 315 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 CCNYL2Q5T2Q4 361 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 STX19Q8N4C7 294 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 MAGEC3Q8TD91 643 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 REPS1Q96D71 796 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 SLC46A2Q9BY10 475 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 KCNK6Q9Y257 313 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 TSC22D4Q9Y3Q8 395 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 LOC100506127A0A0U1RQW1 187 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 OR1F1O43749 312 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 SGTAO43765 313 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 TPST2O60704 377 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 APODP05090 189 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 ATP1B2P14415 290 aaPredicted RBP11.59□□□□□ -0.55
DDR1-223ENST00000324771 BPIP17213 487 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 PPP2R1BP30154 601 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 HSPB3Q12988 150 aa11.59□□□□□ -0.55
DDR1-223ENST00000324771 CSTF3Q12996 717 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms