RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 NAALAD2Q9Y3Q0 740 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 SNX8Q9Y5X2 465 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 NUP214P35658 2090 aaPredicted RBP9.48□□□□□ -0.89
PTPRA-202ENST00000318266 A0A0U1RQS6 177 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.48□□□□□ -0.89
PTPRA-202ENST00000318266 AGAP5A6NIR3 686 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 HSMCR30P0CW71 290 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 WARSP23381 471 aaKnown RBP9.48□□□□□ -0.89
PTPRA-202ENST00000318266 GADD45AP24522 165 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 KRT20P35900 424 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 ERVPABLB-1P60509 514 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 PWP1Q13610 501 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 MAPKAPK3Q16644 382 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 SPATS1Q496A3 300 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 SPANXN4Q5MJ08 99 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 SNAP47Q5SQN1 464 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 MARC1Q5VT66 337 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 NXNL2Q5VZ03 156 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 MRNIPQ6NTE8 343 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 Q6ZPB1 254 aaPredicted RBP9.48□□□□□ -0.89
PTPRA-202ENST00000318266 SVOPLQ8N434 492 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 PARP16Q8N5Y8 322 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 KRTCAP2Q8N6L1 136 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 HASPINQ8TF76 798 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 TSPEARQ8WU66 669 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 RDH12Q96NR8 316 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 CYP2S1Q96SQ9 504 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 CATSPERBQ9H7T0 1116 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 SP110Q9HB58 689 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 TRIM39Q9HCM9 518 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 USE1Q9NZ43 259 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 ZIM2Q9NZV7 527 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 ZNF221Q9UK13 617 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 CDH9Q9ULB4 789 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 A0A0G2JMZ2 1700 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 LRRC37A2A6NM11 1700 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 ADM5C9JUS6 153 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 CCRL2O00421 344 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 TFECO14948 347 aaPredicted RBP9.48□□□□□ -0.89
PTPRA-202ENST00000318266 HOXD8P13378 290 aaPredicted RBP9.48□□□□□ -0.89
PTPRA-202ENST00000318266 GRK3P35626 688 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 CLK3P49761 638 aaKnown RBP9.48□□□□□ -0.89
PTPRA-202ENST00000318266 HMGCS1Q01581 520 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 MVKQ03426 396 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 CDC20Q12834 499 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 GBX1Q14549 363 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 ARHGEF6Q15052 776 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 CARD16Q5EG05 197 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 SYT6Q5T7P8 510 aaPredicted RBP9.48□□□□□ -0.89
PTPRA-202ENST00000318266 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.48□□□□□ -0.89
PTPRA-202ENST00000318266 CIR1Q86X95 450 aaPredicted RBP9.48□□□□□ -0.89
PTPRA-202ENST00000318266 SIDT2Q8NBJ9 832 aaKnown RBP9.48□□□□□ -0.89
PTPRA-202ENST00000318266 SLC13A3Q8WWT9 602 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 KIAA1191Q96A73 305 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 Q96MT0 163 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 C16orf70Q9BSU1 422 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 BEX2Q9BXY8 128 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 ROGDIQ9GZN7 287 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 MOV10Q9HCE1 1003 aaKnown RBP9.48□□□□□ -0.89
PTPRA-202ENST00000318266 CATSPERZQ9NTU4 200 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 ERVK13-1Q9NX77 482 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 OSGIN1Q9UJX0 560 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 AGO1Q9UL18 857 aaKnown RBP9.48□□□□□ -0.89
PTPRA-202ENST00000318266 ABCG2Q9UNQ0 655 aa9.48□□□□□ -0.89
PTPRA-202ENST00000318266 TTC3P53804 2025 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 E9PAM4 449 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 EIF3FO00303 357 aaPredicted RBP9.47□□□□□ -0.89
PTPRA-202ENST00000318266 NIPSNAP2O75323 286 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 RPS17P08708 135 aaKnown RBP9.47□□□□□ -0.89
PTPRA-202ENST00000318266 S100A5P33763 92 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 RAD51Q06609 339 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 MADCAM1Q13477 382 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 CCDC58Q4VC31 144 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 ATAD3CQ5T2N8 411 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 TIGD7Q6NT04 549 aaPredicted RBP9.47□□□□□ -0.89
PTPRA-202ENST00000318266 DPP9Q86TI2 863 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 OR56A4Q8NGH8 313 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 IMP4Q96G21 291 aaKnown RBP9.47□□□□□ -0.89
PTPRA-202ENST00000318266 DEPDC7Q96QD5 511 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 TFB2MQ9H5Q4 396 aaKnown RBP9.47□□□□□ -0.89
PTPRA-202ENST00000318266 SLC25A37Q9NYZ2 338 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 NEUROG3Q9Y4Z2 214 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 MROH6A6NGR9 719 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 IQCF5A8MTL0 148 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 GPR39O43194 453 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 CREG1O75629 220 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 CHRNB1P11230 501 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 TGFBR2P37173 567 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 SLC26A3P40879 764 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 HK3P52790 923 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 NUDT6P53370 316 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 OR2B6P58173 313 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 ABRAXAS2Q15018 415 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 PTPRNQ16849 979 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 TWF2Q6IBS0 349 aaKnown RBP9.47□□□□□ -0.89
PTPRA-202ENST00000318266 FKBP9P1Q75LS8 142 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 ZDHHC21Q8IVQ6 265 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 KLHDC8BQ8IXV7 354 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 DEPDC4Q8N2C3 294 aa9.47□□□□□ -0.89
PTPRA-202ENST00000318266 TOP6BLQ8N6T0 577 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms