RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 DNMT3BQ9UBC3 853 aaKnown RBP16.89■□□□□ 0.29
SCAMP4-201ENST00000316097 PER2O15055 1255 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 WISP3O95389 354 aaPredicted RBP16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 CYBBP04839 570 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 CDH1P12830 882 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 CD1DP15813 335 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 HTR1EP28566 365 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 GALNT3Q14435 633 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 OR4D1Q15615 310 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 C6orf141Q5SZD1 244 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 PROSER1Q86XN7 944 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 CHDHQ8NE62 594 aaPredicted RBP16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 OR13J1Q8NGT2 312 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 TCEAL4Q96EI5 215 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 LRRC3Q9BY71 257 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 CCDC90BQ9GZT6 254 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 SMURF2Q9HAU4 748 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 SPATA7Q9P0W8 599 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 LEF1Q9UJU2 399 aaPredicted RBP16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 CLEC4EQ9ULY5 219 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 PCDHB3Q9Y5E6 796 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 MAN1A2O60476 641 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 EEDO75530 441 aaKnown RBP16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 INMTO95050 263 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 UGT2B4P06133 528 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 AGXTP21549 392 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 BMPR1AP36894 532 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 ZFP36L2P47974 494 aaKnown RBP16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 ARSDP51689 593 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 IST1P53990 364 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 PTPRRQ15256 657 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 KCNJ8Q15842 424 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 CRY1Q16526 586 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 CXorf57Q6NSI4 855 aaKnown RBP16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 SCIMPQ6UWF3 145 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 TMC8Q8IU68 726 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 MUL1Q969V5 352 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 ATP13A3Q9H7F0 1226 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 SEMA4BQ9NPR2 832 aaPredicted RBP16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 CCL26Q9Y258 94 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 SNX5Q9Y5X3 404 aa16.88■□□□□ 0.29
SCAMP4-201ENST00000316097 A0A0U1RQS6 177 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 PTGES3LE9PB15 166 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 H0Y626 953 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 UGT2B11O75310 529 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 CLDN11O75508 207 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 BMP1P13497 986 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 MTHFRP42898 656 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 CTF1Q16619 201 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 CTU2Q2VPK5 515 aaKnown RBP16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 SIRPB2Q5JXA9 342 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 AGAP7PQ5VUJ5 663 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 CCDC80Q76M96 950 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 DSG4Q86SJ6 1040 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 ANKRD13BQ86YJ7 626 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 SLC46A2Q9BY10 475 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 FAM118AQ9NWS6 357 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 CFAP97Q9P2B7 532 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 EVLQ9UI08 416 aaPredicted RBP16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 ANAPC1Q9H1A4 1944 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 PLXNA4Q9HCM2 1894 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 NOBOXO60393 691 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 S1PR4O95977 384 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 ADH1AP07327 375 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 ALOX5P09917 674 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 MTHFD2P13995 350 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 PIGAP37287 484 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 SERPINH1P50454 418 aaKnown RBP16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 GP2P55259 537 aaKnown RBP16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 INAVAQ3KP66 663 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 DEPDC1Q5TB30 811 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 TTC23Q5W5X9 447 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 ZDHHC13Q8IUH4 622 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 BBS7Q8IWZ6 715 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 MAGEH1Q9H213 219 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 CERS4Q9HA82 394 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 AIG1Q9NVV5 245 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 VPS51Q9UID3 782 aa16.87■□□□□ 0.29
SCAMP4-201ENST00000316097 SLC22A3O75751 556 aa16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 TGM1P22735 817 aa16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 ALDH4A1P30038 563 aa16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 POLR2JP52435 117 aaKnown RBP16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 CAMK1Q14012 370 aa16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 INAQ16352 499 aa16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 RBM23Q86U06 439 aaKnown RBP16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 HS3ST5Q8IZT8 346 aa16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 DTWD1Q8N5C7 304 aa16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 MRPL43Q8N983 215 aaKnown RBP16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 ITFG1Q8TB96 612 aa16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 SPPL3Q8TCT6 385 aa16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 TSPEARQ8WU66 669 aa16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 SDCCAG3Q96C92 435 aa16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 POLR1EQ9GZS1 481 aaKnown RBP16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 A0A1B0GVM2 712 aa16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 TYW5A2RUC4 315 aaKnown RBP16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 PFDN6O15212 129 aa16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 NFKBIAP25963 317 aa16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 SLC26A3P40879 764 aa16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 LSM3P62310 102 aaKnown RBP16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 EMX2Q04743 252 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms