RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 M0R3G1 203 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 SLC16A6O15403 523 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 PRLP01236 227 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 CCDC159P0C7I6 412 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 ACVR2AP27037 513 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 CD6P30203 668 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 MAP2K4P45985 399 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 PON2Q15165 354 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 MAPKAPK3Q16644 382 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 ATAD3BQ5T9A4 648 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 ADHFE1Q8IWW8 467 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 CFAP52Q8N1V2 620 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 MINDY2Q8NBR6 621 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 OR6Q1Q8NGQ2 317 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 OR5K1Q8NHB7 308 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 GIPC2Q8TF65 315 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 FBLIM1Q8WUP2 373 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 S100ZQ8WXG8 99 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 EXOC2Q96KP1 924 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 AP5M1Q9H0R1 490 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 EPS8L2Q9H6S3 715 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 RMND5AQ9H871 391 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 FKBPLQ9UIM3 349 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 SLC45A1Q9Y2W3 748 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 PCDHGB1Q9Y5G3 927 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 MITFO75030 526 aaPredicted RBP13.19□□□□□ -0.3
SKA3-202ENST00000314759 GGT5P36269 586 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 NCS1P62166 190 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 RPL38P63173 70 aaKnown RBP13.19□□□□□ -0.3
SKA3-202ENST00000314759 FKBP9P1Q75LS8 142 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 PHACTR4Q8IZ21 702 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 MCOLN3Q8TDD5 553 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 CAPSLQ8WWF8 208 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 MGME1Q9BQP7 344 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 NDEL1Q9GZM8 345 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 TRIT1Q9H3H1 467 aaKnown RBP13.19□□□□□ -0.3
SKA3-202ENST00000314759 DCAF13Q9NV06 445 aaKnown RBP13.19□□□□□ -0.3
SKA3-202ENST00000314759 ERVK-18Q9QC07 812 aa13.19□□□□□ -0.3
SKA3-202ENST00000314759 INTS6Q9UL03 887 aaKnown RBP13.19□□□□□ -0.3
SKA3-202ENST00000314759 A0A0U1RQS6 177 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 C2orf81A6NN90 581 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 BCKDKO14874 412 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 SLC22A1O15245 554 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 SCELO95171 688 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 FTH1P02794 183 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 MSH3P20585 1137 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 MC4RP32245 332 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 IL5RAQ01344 420 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 GTF2H2Q13888 395 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 PTPRRQ15256 657 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 PCBP2Q15366 365 aaKnown RBP eCLIP13.18□□□□□ -0.3
SKA3-202ENST00000314759 TRIP4Q15650 581 aaPredicted RBP13.18□□□□□ -0.3
SKA3-202ENST00000314759 CCL14Q16627 93 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 HIST2H2ACQ16777 129 aaPredicted RBP13.18□□□□□ -0.3
SKA3-202ENST00000314759 GTDC1Q4AE62 458 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 SPANXN4Q5MJ08 99 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 NADSYN1Q6IA69 706 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 GTF2H2CQ6P1K8 395 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 DET1Q7L5Y6 550 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 CHPFQ8IZ52 775 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 OR52E4Q8NGH9 312 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 OR10Q1Q8NGQ4 319 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 PSMA8Q8TAA3 256 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 RORBQ92753 470 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 KCNJ9Q92806 393 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 ZNF566Q969W8 418 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 B3GALT6Q96L58 329 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 FBXO44Q9H4M3 255 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 BPIFA1Q9NP55 256 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 SLC6A13Q9NSD5 602 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 E5RI56 91 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 M0QX08 132 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 PRMT5O14744 637 aaPredicted RBP13.18□□□□□ -0.3
SKA3-202ENST00000314759 GPR39O43194 453 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 ZNF623O75123 536 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 ANGPTL1O95841 491 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 TYMPP19971 482 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 HOXD9P28356 352 aaPredicted RBP13.18□□□□□ -0.3
SKA3-202ENST00000314759 AKT1P31749 480 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 BMPR1AP36894 532 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 TTPAP49638 278 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 GCNT7Q6ZNI0 430 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 LINC00299Q6ZSB3 139 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 GPR149Q86SP6 731 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 ADCK1Q86TW2 530 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 C10orf111Q8N326 155 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 IPPKQ9H8X2 491 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 FBXO8Q9NRD0 319 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 NUDT4Q9NZJ9 180 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 MARCH2Q9P0N8 246 aa13.18□□□□□ -0.3
SKA3-202ENST00000314759 PNMA8BQ9ULN7 279 aaPredicted RBP13.18□□□□□ -0.3
SKA3-202ENST00000314759 CREG1O75629 220 aa13.17□□□□□ -0.3
SKA3-202ENST00000314759 MAGP20916 626 aa13.17□□□□□ -0.3
SKA3-202ENST00000314759 CD9P21926 228 aa13.17□□□□□ -0.3
SKA3-202ENST00000314759 PSMA3P25788 255 aa13.17□□□□□ -0.3
SKA3-202ENST00000314759 CD52P31358 61 aa13.17□□□□□ -0.3
SKA3-202ENST00000314759 FMO3P31513 532 aa13.17□□□□□ -0.3
SKA3-202ENST00000314759 PIK3CGP48736 1102 aa13.17□□□□□ -0.3
SKA3-202ENST00000314759 MAPKAPK2P49137 400 aa13.17□□□□□ -0.3
SKA3-202ENST00000314759 HNRNPFP52597 415 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 205.1 ms