RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 FAM46CQ5VWP2 391 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 FAM171BQ6P995 826 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 DEFB128Q7Z7B8 93 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 ZC3H3Q8IXZ2 948 aaKnown RBP12.95□□□□□ -0.34
SNED1-201ENST00000310397 MARVELD2Q8N4S9 558 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 LPPQ93052 612 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 ISOC1Q96CN7 298 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 BIRC8Q96P09 236 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 ZDHHC2Q9UIJ5 367 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.95□□□□□ -0.34
SNED1-201ENST00000310397 MMP3P08254 477 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 CD247P20963 164 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 TAF10Q12962 218 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 DUSP28Q4G0W2 176 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 STX12Q86Y82 276 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 VANGL1Q8TAA9 524 aaPredicted RBP12.95□□□□□ -0.34
SNED1-201ENST00000310397 ABHD14A-ACY1A0A1B0GW23 586 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 TSPAN1O60635 241 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 HMCESQ96FZ2 354 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 SNX27Q96L92 541 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 THUMPD1Q9NXG2 353 aaKnown RBP12.95□□□□□ -0.34
SNED1-201ENST00000310397 FBXO10Q9UK96 956 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 MRPS33Q9Y291 106 aaKnown RBP12.95□□□□□ -0.34
SNED1-201ENST00000310397 KNL1Q8NG31 2342 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 LRRC14BA6NHZ5 514 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 FFAR2O15552 330 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 VNN1O95497 513 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 MXD1Q05195 221 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 PCLAFQ15004 111 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 MPPE1Q53F39 396 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 SMYD5Q6GMV2 418 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 OR4C6Q8NH72 309 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 TSPEARQ8WU66 669 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 H0YJX3 145 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 IRF6O14896 467 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 SERPINA3P01011 423 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 FMO3P31513 532 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 GPX6P59796 221 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 NAE1Q13564 534 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 PLEKHG4Q58EX7 1191 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 C15orf40Q8WUR7 153 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 CGREF1Q99674 301 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 KCNS3Q9BQ31 491 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 SLC27A5Q9Y2P5 690 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 HCAR3P49019 387 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 DNAJB13P59910 316 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 TMEM110Q86TL2 294 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 ZBED6CLQ96FA7 236 aaPredicted RBP12.95□□□□□ -0.34
SNED1-201ENST00000310397 ITPAQ9BY32 194 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 SMURF2Q9HAU4 748 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 H0YAE9 185 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 TP73O15350 636 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 SRPRAP08240 638 aaKnown RBP12.95□□□□□ -0.34
SNED1-201ENST00000310397 SWI5Q1ZZU3 235 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 HBEGFQ99075 208 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 BCL2L14Q9BZR8 327 aa12.95□□□□□ -0.34
SNED1-201ENST00000310397 IL1BP01584 269 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 PPP2R2BQ00005 443 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 SLC10A6Q3KNW5 377 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 TCEAL5Q5H9L2 206 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.94□□□□□ -0.34
SNED1-201ENST00000310397 EGFL6Q8IUX8 553 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 PHTF2Q8N3S3 785 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 KLHL6Q8WZ60 621 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 MCMBPQ9BTE3 642 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 ZNF487B1APH4 448 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 TEX46H3BTG2 121 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 CHIT1Q13231 466 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 TSC22D1Q15714 1073 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 TPRG1LQ5T0D9 272 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 RANBP3LQ86VV4 465 aaPredicted RBP12.94□□□□□ -0.34
SNED1-201ENST00000310397 TMBIM1Q969X1 311 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 CXorf40BQ96DE9 158 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 TMEM27Q9HBJ8 222 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 C11orf16Q9NQ32 467 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 NKIRAS2Q9NYR9 191 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 ATF4P18848 351 aaPredicted RBP12.94□□□□□ -0.34
SNED1-201ENST00000310397 ACADLP28330 430 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 SNX33Q8WV41 574 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 TRNT1Q96Q11 434 aaKnown RBP12.94□□□□□ -0.34
SNED1-201ENST00000310397 MGME1Q9BQP7 344 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 PCBD2Q9H0N5 130 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 MFSD1Q9H3U5 465 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 SNTG1Q9NSN8 517 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 SLC2A2P11168 524 aaPredicted RBP12.94□□□□□ -0.34
SNED1-201ENST00000310397 CDH15P55291 814 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 LINC00471Q8N535 108 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 NATD1Q8N6N6 113 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 ZNF433Q8N7K0 673 aaPredicted RBP12.94□□□□□ -0.34
SNED1-201ENST00000310397 GEMIN6Q8WXD5 167 aaKnown RBP12.94□□□□□ -0.34
SNED1-201ENST00000310397 CAMK1GQ96NX5 476 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 RHBGQ9H310 441 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 FLRT1Q9NZU1 646 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 MRTO4Q9UKD2 239 aaKnown RBP12.94□□□□□ -0.34
SNED1-201ENST00000310397 ISPDA4D126 451 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 SNX4O95219 450 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 PAPSS2O95340 614 aaPredicted RBP12.94□□□□□ -0.34
SNED1-201ENST00000310397 CD72P21854 359 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 PIK3CBP42338 1070 aa12.94□□□□□ -0.34
SNED1-201ENST00000310397 ZNF45Q02386 682 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms