RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 UBR7Q8N806 425 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 WNT8BQ93098 351 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 LGMNQ99538 433 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 AIFM2Q9BRQ8 373 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 XKR8Q9H6D3 395 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 ANKRA2Q9H9E1 313 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 EBF2Q9HAK2 575 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 PCDHGC3Q9UN70 934 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 FADS2P1A8MWK0 482 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 MPZL2O60487 215 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 PRNPP04156 253 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 CFIP05156 583 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 RPL17P18621 184 aaKnown RBP8.06□□□□□ -1.12
VPS41-202ENST00000310301 ATP6V0D1P61421 351 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 CDKL1Q00532 357 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 CRTC2Q53ET0 693 aaPredicted RBP8.06□□□□□ -1.12
VPS41-202ENST00000310301 PPP1R26Q5T8A7 1209 aaPredicted RBP8.06□□□□□ -1.12
VPS41-202ENST00000310301 METTL21CQ5VZV1 264 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 ANKRD26P1Q6NSI1 321 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 ADGRD1Q6QNK2 874 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 LRRC55Q6ZSA7 311 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 CIR1Q86X95 450 aaPredicted RBP8.06□□□□□ -1.12
VPS41-202ENST00000310301 PEX5LQ8IYB4 626 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 RDH8Q9NYR8 311 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 CNOT6Q9ULM6 557 aaKnown RBP8.06□□□□□ -1.12
VPS41-202ENST00000310301 ALG5Q9Y673 324 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 NID2Q14112 1375 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 FAM86C2PA6NEL3 165 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 PRMT5O14744 637 aaPredicted RBP8.05□□□□□ -1.12
VPS41-202ENST00000310301 ITGB1P05556 798 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 CHRM5P08912 532 aaPredicted RBP8.05□□□□□ -1.12
VPS41-202ENST00000310301 KCNE1P15382 129 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 PITPNAQ00169 270 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 CSTF1Q05048 431 aaKnown RBP8.05□□□□□ -1.12
VPS41-202ENST00000310301 PCDH1Q08174 1060 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 DNASE1L3Q13609 305 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 LSM12Q3MHD2 195 aaKnown RBP8.05□□□□□ -1.12
VPS41-202ENST00000310301 BRMS1LQ5PSV4 323 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 USP45Q70EL2 814 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 RD3Q7Z3Z2 195 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 GRASPQ7Z6J2 395 aaPredicted RBP8.05□□□□□ -1.12
VPS41-202ENST00000310301 TWIST2Q8WVJ9 160 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 ZFP3Q96NJ6 502 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 MRPL45Q9BRJ2 306 aaKnown RBP8.05□□□□□ -1.12
VPS41-202ENST00000310301 C11orf16Q9NQ32 467 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 MTRRQ9UBK8 725 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 CKLFQ9UBR5 152 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 FBXO5Q9UKT4 447 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 INSL5Q9Y5Q6 135 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 BACE2Q9Y5Z0 518 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 TBC1D3DA0A087WVF3 549 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 TBC1D3IA0A087WXS9 549 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 TBC1D3EA0A087X179 549 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 TBC1D3KA0A087X1G2 549 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 A0A088AWK7 358 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 TBC1D3FA6NER0 549 aaPredicted RBP8.05□□□□□ -1.12
VPS41-202ENST00000310301 TBC1D3LB9A6J9 549 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 CACNB4O00305 520 aaPredicted RBP8.05□□□□□ -1.12
VPS41-202ENST00000310301 TBC1D3HP0C7X1 549 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 SLC2A2P11168 524 aaPredicted RBP8.05□□□□□ -1.12
VPS41-202ENST00000310301 GOT1P17174 413 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 ZNF10P21506 573 aaPredicted RBP8.05□□□□□ -1.12
VPS41-202ENST00000310301 HNRNPH3P31942 346 aaKnown RBP8.05□□□□□ -1.12
VPS41-202ENST00000310301 RPIAP49247 311 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 RPL7AP62424 266 aaKnown RBP8.05□□□□□ -1.12
VPS41-202ENST00000310301 MERTKQ12866 999 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 GPR17Q13304 367 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 PTGES3Q15185 160 aaKnown RBP8.05□□□□□ -1.12
VPS41-202ENST00000310301 TBC1D3GQ6DHY5 549 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 TBC1D3CQ6IPX1 549 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 ZNF730Q6ZMV8 503 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 ANKS1BQ7Z6G8 1248 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 TRAPPC5Q8IUR0 188 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 TBC1D3Q8IZP1 549 aaPredicted RBP8.05□□□□□ -1.12
VPS41-202ENST00000310301 DRAXINQ8NBI3 349 aaPredicted RBP8.05□□□□□ -1.12
VPS41-202ENST00000310301 IPCEF1Q8WWN9 437 aaPredicted RBP8.05□□□□□ -1.12
VPS41-202ENST00000310301 PPCDCQ96CD2 204 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 TRMOQ9BU70 441 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 TMEM168Q9H0V1 697 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 SLC32A1Q9H598 525 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 CCDC177Q9NQR7 707 aaPredicted RBP8.05□□□□□ -1.12
VPS41-202ENST00000310301 VWA7Q9Y334 891 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 MFHAS1Q9Y4C4 1052 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 ASTN1O14525 1302 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 A0A075B6Q4 140 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 FAM237AA0A1B0GTK4 181 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 NPEPPSL1A6NEC2 478 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 FPGTO14772 594 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 MAGEB3O15480 346 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 KLRC4O43908 158 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 ACSL4O60488 711 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 TBX10O75333 385 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 RBMXL2O75526 392 aaKnown RBP8.05□□□□□ -1.12
VPS41-202ENST00000310301 C2P06681 752 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 GNAO1P09471 354 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 TLX1P31314 330 aaPredicted RBP8.05□□□□□ -1.12
VPS41-202ENST00000310301 CDH15P55291 814 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 PPM1JQ5JR12 505 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 GARNL3Q5VVW2 1013 aa8.05□□□□□ -1.12
VPS41-202ENST00000310301 ADAMTSL2Q86TH1 951 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms