RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 GIPC2Q8TF65 315 aa14.16□□□□□ -0.14
CDT1-201ENST00000301019 MAGEB10Q96LZ2 347 aaPredicted RBP14.16□□□□□ -0.14
CDT1-201ENST00000301019 LRRC4Q9HBW1 653 aa14.16□□□□□ -0.14
CDT1-201ENST00000301019 ZNF302Q9NR11 478 aa14.16□□□□□ -0.14
CDT1-201ENST00000301019 SNTG1Q9NSN8 517 aa14.16□□□□□ -0.14
CDT1-201ENST00000301019 COMMD8Q9NX08 183 aa14.16□□□□□ -0.14
CDT1-201ENST00000301019 PGAP2Q9UHJ9 254 aa14.16□□□□□ -0.14
CDT1-201ENST00000301019 ANKRD6Q9Y2G4 727 aa14.16□□□□□ -0.14
CDT1-201ENST00000301019 A0A1W2PP18 115 aa14.16□□□□□ -0.14
CDT1-201ENST00000301019 WWP2O00308 870 aa14.16□□□□□ -0.14
CDT1-201ENST00000301019 MDM4O15151 490 aa14.16□□□□□ -0.14
CDT1-201ENST00000301019 PRSS56P0CW18 603 aa14.16□□□□□ -0.14
CDT1-201ENST00000301019 TNFSF8P32971 234 aa14.16□□□□□ -0.14
CDT1-201ENST00000301019 CTSKP43235 329 aa14.16□□□□□ -0.14
CDT1-201ENST00000301019 AKR1D1P51857 326 aa14.16□□□□□ -0.14
CDT1-201ENST00000301019 CDKN2DP55273 166 aa14.16□□□□□ -0.14
CDT1-201ENST00000301019 DMC1Q14565 340 aa14.16□□□□□ -0.14
CDT1-201ENST00000301019 LACC1Q8IV20 430 aa14.16□□□□□ -0.14
CDT1-201ENST00000301019 ZBTB44Q8NCP5 570 aa14.16□□□□□ -0.14
CDT1-201ENST00000301019 OR2T12Q8NG77 320 aa14.16□□□□□ -0.14
CDT1-201ENST00000301019 SLC7A6Q92536 515 aa14.16□□□□□ -0.14
CDT1-201ENST00000301019 MRPL4Q9BYD3 311 aaKnown RBP14.16□□□□□ -0.14
CDT1-201ENST00000301019 SLA2Q9H6Q3 261 aa14.16□□□□□ -0.14
CDT1-201ENST00000301019 SYTL2Q9HCH5 934 aa14.16□□□□□ -0.14
CDT1-201ENST00000301019 GPR83Q9NYM4 423 aa14.16□□□□□ -0.14
CDT1-201ENST00000301019 TMX2Q9Y320 296 aa14.16□□□□□ -0.14
CDT1-201ENST00000301019 SNX4O95219 450 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 VDRP11473 427 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 CAP2P40123 477 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 GLUD2P49448 558 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 SLC35A2P78381 396 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 CDH18Q13634 790 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 TNFAIP1Q13829 316 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 GBX1Q14549 363 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 RBBP7Q16576 425 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 PUS10Q3MIT2 529 aaKnown RBP14.15□□□□□ -0.14
CDT1-201ENST00000301019 KLHL17Q6TDP4 642 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 RIMKLAQ8IXN7 391 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 SLC7A14Q8TBB6 771 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 DNASE1L2Q92874 299 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.15□□□□□ -0.14
CDT1-201ENST00000301019 KCNC2Q96PR1 638 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 OR2A14Q96R47 310 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 RBM4BQ9BQ04 359 aaKnown RBP14.15□□□□□ -0.14
CDT1-201ENST00000301019 RBM4Q9BWF3 364 aaKnown RBP14.15□□□□□ -0.14
CDT1-201ENST00000301019 NT5C1AQ9BXI3 368 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 PPIL3Q9H2H8 161 aaKnown RBP14.15□□□□□ -0.14
CDT1-201ENST00000301019 ELOVL6Q9H5J4 265 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 MINDY3Q9H8M7 445 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 SPATA6Q9NWH7 488 aaPredicted RBP14.15□□□□□ -0.14
CDT1-201ENST00000301019 GLTPQ9NZD2 209 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 VAPAQ9P0L0 249 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 RNF181Q9P0P0 153 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 CPNE7Q9UBL6 633 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 SNX7Q9UNH6 387 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 CLDN5O00501 218 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 KIAA0513O60268 411 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 SERPINA1P01009 418 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 PDGFAP04085 211 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 STSP08842 583 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 LTA4HP09960 611 aaKnown RBP14.15□□□□□ -0.14
CDT1-201ENST00000301019 SSTR2P30874 369 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 SCNN1GP51170 649 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 CLCN3P51790 818 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 GPR50Q13585 617 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 UAP1L1Q3KQV9 507 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 ZNF678Q5SXM1 525 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 PGBD5Q8N414 524 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 TTPALQ9BTX7 342 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 C1QTNF7Q9BXJ2 289 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 MS4A7Q9GZW8 240 aaPredicted RBP14.15□□□□□ -0.14
CDT1-201ENST00000301019 SLC35C2Q9NQQ7 365 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 C8orf4Q9NR00 106 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 MIOSQ9NXC5 875 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 HACL1Q9UJ83 578 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 KCTD3Q9Y597 815 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 ERN1O75460 977 aaKnown RBP14.15□□□□□ -0.14
CDT1-201ENST00000301019 FKBP9O95302 570 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 ICAM1P05362 532 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 ITGB1P05556 798 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 POU2F1P14859 743 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 EFNA1P20827 205 aaPredicted RBP14.15□□□□□ -0.14
CDT1-201ENST00000301019 MYL9P24844 172 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 MAXP61244 160 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 FAPQ12884 760 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 PARP15Q460N3 678 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 IGSF11Q5DX21 431 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 XKR3Q5GH77 459 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 PRMT9Q6P2P2 845 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 IDO2Q6ZQW0 420 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 HFE2Q6ZVN8 426 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 ISL2Q96A47 359 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 FSD1LQ9BXM9 530 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 ITPAQ9BY32 194 aa14.15□□□□□ -0.14
CDT1-201ENST00000301019 SHROOM3Q8TF72 1996 aa14.14□□□□□ -0.15
CDT1-201ENST00000301019 GREB1LQ9C091 1923 aaPredicted RBP14.14□□□□□ -0.15
CDT1-201ENST00000301019 CTRB1P17538 263 aa14.14□□□□□ -0.15
CDT1-201ENST00000301019 PIK3CBP42338 1070 aa14.14□□□□□ -0.15
CDT1-201ENST00000301019 TOP3AQ13472 1001 aaPredicted RBP14.14□□□□□ -0.15
CDT1-201ENST00000301019 CTRB2Q6GPI1 263 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms