RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 CATSPER1Q8NEC5 780 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 PBXIP1Q96AQ6 731 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 CGREF1Q99674 301 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 ATG10Q9H0Y0 220 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 IRF2BPLQ9H1B7 796 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 ZNF696Q9H7X3 374 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 WDR70Q9NW82 654 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 ANKRD36A6QL64 1941 aa9.92□□□□□ -0.82
FOXN4-201ENST00000299162 ATG2BQ96BY7 2078 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 B4GAT1O43505 415 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 CBFA2T3O75081 653 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 GSNP06396 782 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 ZNF23P17027 643 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 BCAP31P51572 246 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 ATP6V0D1P61421 351 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 CACNG1Q06432 222 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 NFATC2Q13469 925 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 ARHGEF6Q15052 776 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 IMPG1Q17R60 797 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 PLEKHG6Q3KR16 790 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 SAMD4BQ5PRF9 694 aaKnown RBP9.91□□□□□ -0.82
FOXN4-201ENST00000299162 DPY19L3Q6ZPD9 716 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 CHSY3Q70JA7 882 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 ANKRD46Q86W74 232 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 ADCY4Q8NFM4 1077 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 PIH1D2Q8WWB5 315 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 DLG3Q92796 817 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 ASB9Q96DX5 294 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 FBXL20Q96IG2 436 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 HERC2P3Q9BVR0 1158 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 ADNPQ9H2P0 1102 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 IL21Q9HBE4 155 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 POLE4Q9NR33 117 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 WNT6Q9Y6F9 365 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 OAS3Q9Y6K5 1087 aaKnown RBP9.91□□□□□ -0.82
FOXN4-201ENST00000299162 LEFTY2O00292 366 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 WISP3O95389 354 aaPredicted RBP9.91□□□□□ -0.82
FOXN4-201ENST00000299162 B3GALT4O96024 378 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 ITPKAP23677 461 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 HMGCLP35914 325 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 PTGER3P43115 390 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 DNASE1L3Q13609 305 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 GTF2H2Q13888 395 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 AP5B1Q2VPB7 878 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 ATP13A5Q4VNC0 1218 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 RFTN2Q52LD8 501 aaPredicted RBP9.91□□□□□ -0.82
FOXN4-201ENST00000299162 KANK2Q63ZY3 851 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 NANOGP8Q6NSW7 305 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 GTF2H2CQ6P1K8 395 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 SERPINA13PQ6UXR4 307 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 CHST9Q7L1S5 443 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 GOLGA7Q7Z5G4 137 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 ZC3H7AQ8IWR0 971 aaKnown RBP9.91□□□□□ -0.82
FOXN4-201ENST00000299162 FAM20CQ8IXL6 584 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 CBR4Q8N4T8 237 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 Q8N9G6 341 aaPredicted RBP9.91□□□□□ -0.82
FOXN4-201ENST00000299162 HHIPL1Q96JK4 782 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 TCF25Q9BQ70 676 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 CCDC90BQ9GZT6 254 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 EPB41L1Q9H4G0 881 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 CERS4Q9HA82 394 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 SIAEQ9HAT2 523 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 CLK4Q9HAZ1 481 aaKnown RBP9.91□□□□□ -0.82
FOXN4-201ENST00000299162 REV3LO60673 3130 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 CFAP99D6REC4 459 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 E2F3O00716 465 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 GMNNO75496 209 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 SLC22A3O75751 556 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 PARNO95453 639 aaKnown RBP9.91□□□□□ -0.82
FOXN4-201ENST00000299162 ESRRBO95718 433 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 IGSF6O95976 241 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 UBL4AP11441 157 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 RFTN1Q14699 578 aaPredicted RBP9.91□□□□□ -0.82
FOXN4-201ENST00000299162 TEAD2Q15562 447 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 TPGS2Q68CL5 300 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 CNKSR3Q6P9H4 555 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 KREMEN2Q8NCW0 462 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 RHEBL1Q8TAI7 183 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 LRRC58Q96CX6 371 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 ATP13A3Q9H7F0 1226 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 CMTM6Q9NX76 183 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 ARL15Q9NXU5 204 aa9.91□□□□□ -0.82
FOXN4-201ENST00000299162 CNOT6Q9ULM6 557 aaKnown RBP9.91□□□□□ -0.82
FOXN4-201ENST00000299162 TRBC1P01850 177 aa9.9□□□□□ -0.82
FOXN4-201ENST00000299162 ESR1P03372 595 aa9.9□□□□□ -0.82
FOXN4-201ENST00000299162 IL12AP29459 219 aa9.9□□□□□ -0.82
FOXN4-201ENST00000299162 SERPINA4P29622 427 aa9.9□□□□□ -0.82
FOXN4-201ENST00000299162 ALDH4A1P30038 563 aa9.9□□□□□ -0.82
FOXN4-201ENST00000299162 CLCN7P51798 805 aa9.9□□□□□ -0.82
FOXN4-201ENST00000299162 WDR5P61964 334 aaKnown RBP9.9□□□□□ -0.82
FOXN4-201ENST00000299162 IL1RL1Q01638 556 aa9.9□□□□□ -0.82
FOXN4-201ENST00000299162 RAB33AQ14088 237 aa9.9□□□□□ -0.82
FOXN4-201ENST00000299162 HERC3Q15034 1050 aa9.9□□□□□ -0.82
FOXN4-201ENST00000299162 SF1Q15637 639 aaKnown RBP9.9□□□□□ -0.82
FOXN4-201ENST00000299162 LRRC26Q2I0M4 334 aa9.9□□□□□ -0.82
FOXN4-201ENST00000299162 C6orf136Q5SQH8 315 aa9.9□□□□□ -0.82
FOXN4-201ENST00000299162 DCDC5Q6ZRR9 648 aa9.9□□□□□ -0.82
FOXN4-201ENST00000299162 SFRP1Q8N474 314 aa9.9□□□□□ -0.82
FOXN4-201ENST00000299162 SLC15A4Q8N697 577 aa9.9□□□□□ -0.82
FOXN4-201ENST00000299162 PSD4Q8NDX1 1056 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms