RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 ZC3H12BQ5HYM0 836 aaKnown RBP9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 LRIF1Q5T3J3 769 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 NECAB2Q7Z6G3 386 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 ADHFE1Q8IWW8 467 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 EID3Q8N140 333 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 ELMOD1Q8N336 334 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 MAGEE2Q8TD90 523 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 HDAC2Q92769 488 aaKnown RBP9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 PPM1MQ96MI6 270 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 RBM4BQ9BQ04 359 aaKnown RBP9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 RBM4Q9BWF3 364 aaKnown RBP9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 CXorf21Q9HAI6 301 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 PLGRKTQ9HBL7 147 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 ZDHHC3Q9NYG2 299 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 KIAA1522Q9P206 1035 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 SNX6Q9UNH7 406 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 FCF1Q9Y324 198 aaKnown RBP9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 PPIL1Q9Y3C6 166 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 MICAL3Q7RTP6 2002 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 ELOVL7A1L3X0 281 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 C2orf78A6NCI8 922 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 PABPN1LA6NDY0 278 aaKnown RBP9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 GREM1O60565 184 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 PRMT3O60678 531 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 CLDN9O95484 217 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 PGRP06401 933 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 CNPP09543 421 aaKnown RBP9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 MPC1LP0DKB6 136 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 TMBIM6P55061 237 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 RFTN2Q52LD8 501 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 MPPE1Q53F39 396 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 RUNDC3AQ59EK9 446 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 ATXN7L2Q5T6C5 722 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 BROXQ5VW32 411 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 SCIMPQ6UWF3 145 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 USP45Q70EL2 814 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 GPR149Q86SP6 731 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 CLVS1Q8IUQ0 354 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 MICU2Q8IYU8 434 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 DRAXINQ8NBI3 349 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 B4GALNT2Q8NHY0 566 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 FAM110BQ8TC76 370 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 EID2BQ96D98 161 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 METTL2AQ96IZ6 378 aaKnown RBP9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 ITCHQ96J02 903 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 CDK15Q96Q40 435 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 SEPHS2Q99611 448 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 KCNH6Q9H252 994 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 SLC32A1Q9H598 525 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 ABCB8Q9NUT2 735 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 ELOVL2Q9NXB9 296 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 ZNF490Q9ULM2 529 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 MAPRE3Q9UPY8 281 aa9.81□□□□□ -0.84
TNFRSF11B-201ENST00000297350 IGLV3-16A0A075B6K0 115 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 TRBV5-3A0A0A0MS03 114 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 A0A1B0GTW7 788 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 UPK1AO00322 258 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 PRRG1O14668 218 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 SPATA31D3P0C874 917 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 BPIP17213 487 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 PCSK6P29122 969 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 CLDN8P56748 225 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 SNRPD1P62314 119 aaKnown RBP9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 FBXO48Q5FWF7 155 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 SPATA31D4Q6ZUB0 917 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 TPRG1Q6ZUI0 275 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 NEK10Q6ZWH5 1172 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 HTR3DQ70Z44 454 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 THAP5Q7Z6K1 395 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 DNAJB7Q7Z6W7 309 aaPredicted RBP9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 C8orf59Q8N0T1 100 aaPredicted RBP9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 TMEM132CQ8N3T6 1108 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 ZCCHC7Q8N3Z6 543 aaKnown RBP9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 ZNF557Q8N988 423 aaPredicted RBP9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 ZNF555Q8NEP9 628 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 FIBINQ8TAL6 211 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 STARD8Q92502 1023 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 EZH1Q92800 747 aaPredicted RBP9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 TMBIM1Q969X1 311 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 TESCQ96BS2 214 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 SMIM14Q96QK8 99 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 VN1R3Q9BXE9 311 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 EMILIN2Q9BXX0 1053 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 NTN4Q9HB63 628 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 SLAMF8Q9P0V8 285 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 OGDHLQ9ULD0 1010 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 NEUROG3Q9Y4Z2 214 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 IQCF5A8MTL0 148 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 G3V2T6 193 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 WNT9AO14904 365 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 SNAP29O95721 258 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 OR56A5P0C7T3 313 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 CTPS1P17812 591 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 NFKBIAP25963 317 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 HNF1BP35680 557 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 MTHFRP42898 656 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 AP1S2P56377 157 aa9.8□□□□□ -0.84
TNFRSF11B-201ENST00000297350 MTPNP58546 118 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms