RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 NECTIN4Q96NY8 510 aa20.89■□□□□ 0.93
SOX17-201ENST00000297316 IPPKQ9H8X2 491 aa20.89■□□□□ 0.93
SOX17-201ENST00000297316 E7ENX8 843 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 NR5A2O00482 541 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 NRP2O60462 931 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 FKBP6O75344 327 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 SMNDC1O75940 238 aaKnown RBP eCLIP20.88■□□□□ 0.93
SOX17-201ENST00000297316 PBLDP30039 288 aaPredicted RBP20.88■□□□□ 0.93
SOX17-201ENST00000297316 GPR1P46091 355 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 AP2B1P63010 937 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 BLMHQ13867 455 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 Q6ZSR9 355 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 CXorf40AQ8TE69 158 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 SLC25A23Q9BV35 468 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 MKRN2Q9H000 416 aaKnown RBP20.88■□□□□ 0.93
SOX17-201ENST00000297316 SDR39U1Q9NRG7 319 aaPredicted RBP20.88■□□□□ 0.93
SOX17-201ENST00000297316 MRGBPQ9NV56 204 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 WWOXQ9NZC7 414 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 GPR45Q9Y5Y3 372 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 A0A1W2PP55 124 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 MRASO14807 208 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 GIPC1O14908 333 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 CBSLP0DN79 551 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 CAPN3P20807 821 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 CBSP35520 551 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 ATXN3P54252 364 aaPredicted RBP20.88■□□□□ 0.93
SOX17-201ENST00000297316 CRY1Q16526 586 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 TMEM196Q5HYL7 178 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 TMEM220Q6QAJ8 160 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 KBTBD2Q8IY47 623 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 MIER2Q8N344 545 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 LRCH3Q96II8 777 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 TEX37Q96LM6 180 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 SERPINI1Q99574 410 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 SLC39A3Q9BRY0 314 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 C1orf50Q9BV19 199 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 LIMD1Q9UGP4 676 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 PDE10AQ9Y233 779 aa20.88■□□□□ 0.93
SOX17-201ENST00000297316 COL4A2P08572 1712 aa20.87■□□□□ 0.93
SOX17-201ENST00000297316 IGLON5A6NGN9 336 aa20.87■□□□□ 0.93
SOX17-201ENST00000297316 SYNCRIPO60506 623 aaKnown RBP20.87■□□□□ 0.93
SOX17-201ENST00000297316 TNFRSF4P43489 277 aa20.87■□□□□ 0.93
SOX17-201ENST00000297316 PREPP48147 710 aa20.87■□□□□ 0.93
SOX17-201ENST00000297316 ZXDCQ2QGD7 858 aaPredicted RBP20.87■□□□□ 0.93
SOX17-201ENST00000297316 FAM46CQ5VWP2 391 aa20.87■□□□□ 0.93
SOX17-201ENST00000297316 OGFOD2Q6N063 350 aa20.87■□□□□ 0.93
SOX17-201ENST00000297316 AAGABQ6PD74 315 aa20.87■□□□□ 0.93
SOX17-201ENST00000297316 UBE2R2Q712K3 238 aaPredicted RBP20.87■□□□□ 0.93
SOX17-201ENST00000297316 HDDC3Q8N4P3 179 aa20.87■□□□□ 0.93
SOX17-201ENST00000297316 CD244Q9BZW8 370 aa20.87■□□□□ 0.93
SOX17-201ENST00000297316 OR2AG1Q9H205 316 aa20.87■□□□□ 0.93
SOX17-201ENST00000297316 NDE1Q9NXR1 346 aa20.87■□□□□ 0.93
SOX17-201ENST00000297316 ANGPTL2Q9UKU9 493 aa20.87■□□□□ 0.93
SOX17-201ENST00000297316 EIF4E1BA6NMX2 242 aaKnown RBP20.87■□□□□ 0.93
SOX17-201ENST00000297316 LIN7AO14910 233 aaPredicted RBP20.87■□□□□ 0.93
SOX17-201ENST00000297316 CHEK2O96017 543 aa20.87■□□□□ 0.93
SOX17-201ENST00000297316 TCN1P20061 433 aaPredicted RBP20.87■□□□□ 0.93
SOX17-201ENST00000297316 CDC16Q13042 620 aa20.87■□□□□ 0.93
SOX17-201ENST00000297316 METTL6Q8TCB7 284 aa20.87■□□□□ 0.93
SOX17-201ENST00000297316 JADE3Q92613 823 aa20.87■□□□□ 0.93
SOX17-201ENST00000297316 RDH14Q9HBH5 336 aa20.87■□□□□ 0.93
SOX17-201ENST00000297316 KLHL42Q9P2K6 505 aa20.87■□□□□ 0.93
SOX17-201ENST00000297316 H3BNX3 289 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 NVLO15381 856 aaKnown RBP20.86■□□□□ 0.93
SOX17-201ENST00000297316 NUAK1O60285 661 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 ADAM23O75077 832 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 VPS4BO75351 444 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 AP2A2O94973 939 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 PCDH8O95206 1070 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 RPIAP49247 311 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 CCDC85BQ15834 202 aaPredicted RBP20.86■□□□□ 0.93
SOX17-201ENST00000297316 VPS26BQ4G0F5 336 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 SULT1C3Q6IMI6 304 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 C8orf82Q6P1X6 216 aaPredicted RBP20.86■□□□□ 0.93
SOX17-201ENST00000297316 EFL1Q7Z2Z2 1120 aaKnown RBP20.86■□□□□ 0.93
SOX17-201ENST00000297316 KBTBD6Q86V97 674 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 SFRP1Q8N474 314 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 IL17RCQ8NAC3 791 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 ATP6V1E2Q96A05 226 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 SLC52A3Q9NQ40 469 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 AIG1Q9NVV5 245 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 ADA2Q9NZK5 511 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 MAP10Q9P2G4 905 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 GULP1Q9UBP9 304 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 ASGR2P07307 311 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 COL9A1P20849 921 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 ATP6V1C1P21283 382 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 ZFP36L2P47974 494 aaKnown RBP20.86■□□□□ 0.93
SOX17-201ENST00000297316 PIK3CGP48736 1102 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 PLEKHS1Q5SXH7 462 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 UBTD2Q8WUN7 234 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 ASB11Q8WXH4 323 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 SPDL1Q96EA4 605 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 KCNK12Q9HB15 430 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 GMPR2Q9P2T1 348 aaKnown RBP20.86■□□□□ 0.93
SOX17-201ENST00000297316 CIDEBQ9UHD4 219 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 PCYT1BQ9Y5K3 369 aaPredicted RBP20.86■□□□□ 0.93
SOX17-201ENST00000297316 PIAS3Q9Y6X2 628 aa20.86■□□□□ 0.93
SOX17-201ENST00000297316 PRR23AA6NEV1 266 aa20.85■□□□□ 0.93
SOX17-201ENST00000297316 RNASEH2AO75792 299 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms