RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 IGF2RP11717 2491 aa11.79□□□□□ -0.52
HMGB2-201ENST00000296503 DRD4P21917 467 aa11.79□□□□□ -0.52
HMGB2-201ENST00000296503 ARNTP27540 789 aa11.79□□□□□ -0.52
HMGB2-201ENST00000296503 ECHS1P30084 290 aa11.79□□□□□ -0.52
HMGB2-201ENST00000296503 CSF2RBP32927 897 aa11.79□□□□□ -0.52
HMGB2-201ENST00000296503 CSTF2P33240 577 aaKnown RBP eCLIP11.79□□□□□ -0.52
HMGB2-201ENST00000296503 MAGEA3P43357 314 aa11.79□□□□□ -0.52
HMGB2-201ENST00000296503 CCNG1P51959 295 aa11.79□□□□□ -0.52
HMGB2-201ENST00000296503 CLNS1AP54105 237 aaKnown RBP11.79□□□□□ -0.52
HMGB2-201ENST00000296503 CSE1LP55060 971 aaKnown RBP11.79□□□□□ -0.52
HMGB2-201ENST00000296503 ELF3P78545 371 aaPredicted RBP11.79□□□□□ -0.52
HMGB2-201ENST00000296503 DHX9Q08211 1270 aaKnown RBP11.79□□□□□ -0.52
HMGB2-201ENST00000296503 ZNF844Q08AG5 666 aa11.79□□□□□ -0.52
HMGB2-201ENST00000296503 TRA2AQ13595 282 aaKnown RBP eCLIP11.79□□□□□ -0.522e-18■■■■■ 54.7
HMGB2-201ENST00000296503 BOP1Q14137 746 aaKnown RBP11.79□□□□□ -0.52
HMGB2-201ENST00000296503 MORF4L2Q15014 288 aa11.79□□□□□ -0.52
HMGB2-201ENST00000296503 BBS9Q3SYG4 887 aa11.79□□□□□ -0.52
HMGB2-201ENST00000296503 DUS1LQ6P1R4 473 aaKnown RBP11.79□□□□□ -0.52
HMGB2-201ENST00000296503 XKR5Q6UX68 686 aa11.79□□□□□ -0.52
HMGB2-201ENST00000296503 TMEM135Q86UB9 458 aa11.79□□□□□ -0.52
HMGB2-201ENST00000296503 PDIK1LQ8N165 341 aa11.79□□□□□ -0.52
HMGB2-201ENST00000296503 PHC3Q8NDX5 983 aa11.79□□□□□ -0.52
HMGB2-201ENST00000296503 ARMC2Q8NEN0 867 aa11.79□□□□□ -0.52
HMGB2-201ENST00000296503 FGF11Q92914 225 aa11.79□□□□□ -0.52
HMGB2-201ENST00000296503 TMEM159Q96B96 161 aa11.79□□□□□ -0.52
HMGB2-201ENST00000296503 TLCD1Q96CP7 247 aa11.79□□□□□ -0.52
HMGB2-201ENST00000296503 SNF8Q96H20 258 aa11.79□□□□□ -0.52
HMGB2-201ENST00000296503 RMDN2Q96LZ7 410 aa11.79□□□□□ -0.52
HMGB2-201ENST00000296503 SLC46A1Q96NT5 459 aa11.79□□□□□ -0.52
HMGB2-201ENST00000296503 RABEP2Q9H5N1 569 aa11.79□□□□□ -0.52
HMGB2-201ENST00000296503 IL1RAPL1Q9NZN1 696 aa11.79□□□□□ -0.52
HMGB2-201ENST00000296503 PISDQ9UG56 409 aa11.79□□□□□ -0.52
HMGB2-201ENST00000296503 SLC12A4Q9UP95 1085 aa11.79□□□□□ -0.52
HMGB2-201ENST00000296503 SNX24Q9Y343 169 aa11.79□□□□□ -0.52
HMGB2-201ENST00000296503 PCDHGA8Q9Y5G5 932 aa11.79□□□□□ -0.52
HMGB2-201ENST00000296503 FRYQ5TBA9 3013 aa11.79□□□□□ -0.52
HMGB2-201ENST00000296503 PMS2P1A4D2B8 440 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 IQCF5A8MTL0 148 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 SMAPO00193 183 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 USP1O94782 785 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 NDUFS1P28331 727 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 FMO4P31512 558 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 ARCN1P48444 511 aaKnown RBP11.78□□□□□ -0.52
HMGB2-201ENST00000296503 CD151P48509 253 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 ITGA8P53708 1063 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 MAPK10P53779 464 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 PLOD1Q02809 727 aaPredicted RBP11.78□□□□□ -0.52
HMGB2-201ENST00000296503 C16orf72Q14CZ0 275 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 PIGWQ7Z7B1 504 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 ANKS4BQ8N8V4 417 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 ZFPM2Q8WW38 1151 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 TFGQ92734 400 aaPredicted RBP11.78□□□□□ -0.52
HMGB2-201ENST00000296503 CHMP6Q96FZ7 201 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 PRR11Q96HE9 360 aaPredicted RBP11.78□□□□□ -0.52
HMGB2-201ENST00000296503 ZNF578Q96N58 590 aaPredicted RBP11.78□□□□□ -0.52
HMGB2-201ENST00000296503 TCF12Q99081 682 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 OR52A5Q9H2C5 316 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 C20orf96Q9NUD7 363 aaPredicted RBP11.78□□□□□ -0.52
HMGB2-201ENST00000296503 GNPTGQ9UJJ9 305 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 RAXQ9Y2V3 346 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 COL27A1Q8IZC6 1860 aaPredicted RBP11.78□□□□□ -0.52
HMGB2-201ENST00000296503 FAM187AA6NFU0 413 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 HGSO14964 777 aaPredicted RBP11.78□□□□□ -0.52
HMGB2-201ENST00000296503 BANF1O75531 89 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 THRAP10827 490 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 ITIH1P19827 911 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 HSPA14Q0VDF9 509 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 LONRF1Q17RB8 773 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 TBC1D25Q3MII6 688 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 ZNF658BQ4V348 819 aaPredicted RBP11.78□□□□□ -0.52
HMGB2-201ENST00000296503 HIBCHQ6NVY1 386 aaPredicted RBP11.78□□□□□ -0.52
HMGB2-201ENST00000296503 KLHL35Q6PF15 583 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 LRRC6Q86X45 466 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 AGGF1Q8N302 714 aaeCLIP11.78□□□□□ -0.524e-33■■■■■ 29.8
HMGB2-201ENST00000296503 CCDC197Q8NCU1 140 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 AGBL5Q8NDL9 886 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 ASZ1Q8WWH4 475 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 IFT81Q8WYA0 676 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 PWWP2AQ96N64 755 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 DCBLD2Q96PD2 775 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 TGM7Q96PF1 710 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 PANX3Q96QZ0 392 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 EBNA1BP2Q99848 306 aaKnown RBP11.78□□□□□ -0.52
HMGB2-201ENST00000296503 PPANQ9NQ55 473 aaKnown RBP11.78□□□□□ -0.52
HMGB2-201ENST00000296503 THSD1Q9NS62 852 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 CRYL1Q9Y2S2 319 aa11.78□□□□□ -0.52
HMGB2-201ENST00000296503 URB1O60287 2271 aaKnown RBP11.78□□□□□ -0.52
HMGB2-201ENST00000296503 ZCWPW2A0A1B0GU75 182 aa11.77□□□□□ -0.53
HMGB2-201ENST00000296503 SLC5A10A0PJK1 596 aa11.77□□□□□ -0.53
HMGB2-201ENST00000296503 NDC80O14777 642 aa11.77□□□□□ -0.53
HMGB2-201ENST00000296503 CAPN5O15484 640 aaPredicted RBP11.77□□□□□ -0.53
HMGB2-201ENST00000296503 RAD51CO43502 376 aa11.77□□□□□ -0.53
HMGB2-201ENST00000296503 DXOO77932 396 aaKnown RBP11.77□□□□□ -0.53
HMGB2-201ENST00000296503 APOA4P06727 396 aa11.77□□□□□ -0.53
HMGB2-201ENST00000296503 PGAM1P18669 254 aa11.77□□□□□ -0.53
HMGB2-201ENST00000296503 OGNP20774 298 aaKnown RBP11.77□□□□□ -0.53
HMGB2-201ENST00000296503 CCR7P32248 378 aa11.77□□□□□ -0.53
HMGB2-201ENST00000296503 ERVPABLB-1P60509 514 aa11.77□□□□□ -0.53
HMGB2-201ENST00000296503 PRKG2Q13237 762 aa11.77□□□□□ -0.53
HMGB2-201ENST00000296503 CTBP1Q13363 440 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms