RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 IL23AQ9NPF7 189 aa11.15□□□□□ -0.63
SCLT1-201ENST00000281142 SMPD4Q9NXE4 827 aa11.15□□□□□ -0.63
SCLT1-201ENST00000281142 VNN3Q9NY84 501 aa11.15□□□□□ -0.63
SCLT1-201ENST00000281142 ADGRE2Q9UHX3 823 aa11.15□□□□□ -0.63
SCLT1-201ENST00000281142 EIF2B4Q9UI10 523 aaKnown RBP11.15□□□□□ -0.63
SCLT1-201ENST00000281142 INTS6Q9UL03 887 aaKnown RBP11.15□□□□□ -0.63
SCLT1-201ENST00000281142 FAM234BA2RU67 622 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 SYCE1LA8MT33 242 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 CD3EAPO15446 510 aaKnown RBP11.14□□□□□ -0.63
SCLT1-201ENST00000281142 KCNK2O95069 426 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 FMO4P31512 558 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 GABARAPL2P60520 117 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 GTDC1Q4AE62 458 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 ANKS6Q68DC2 871 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 C10orf111Q8N326 155 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 MINDY2Q8NBR6 621 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 FAM83FQ8NEG4 500 aaPredicted RBP11.14□□□□□ -0.63
SCLT1-201ENST00000281142 OR7G1Q8NGA0 311 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 SLC47A1Q96FL8 570 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 IMP4Q96G21 291 aaKnown RBP11.14□□□□□ -0.63
SCLT1-201ENST00000281142 SLC25A51Q9H1U9 297 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 COMMD8Q9NX08 183 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 TMEFF2Q9UIK5 374 aaPredicted RBP11.14□□□□□ -0.63
SCLT1-201ENST00000281142 MED16Q9Y2X0 877 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 PCDHGA10Q9Y5H3 936 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 RGS13O14921 159 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 TBX1O43435 398 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 TULP3O75386 442 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 SEC24AO95486 1093 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 TRIP4Q15650 581 aaPredicted RBP11.14□□□□□ -0.63
SCLT1-201ENST00000281142 COLEC12Q5KU26 742 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 ZNF691Q5VV52 312 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 OTOP2Q7RTS6 562 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 B3GNT8Q7Z7M8 397 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 PHACTR4Q8IZ21 702 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 PGBD5Q8N414 524 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 ANKK1Q8NFD2 765 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 PJA1Q8NG27 643 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 S100ZQ8WXG8 99 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 RORBQ92753 470 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 UBE2FQ969M7 185 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 MYLPFQ96A32 169 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 PYCR2Q96C36 320 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 HMCESQ96FZ2 354 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 ZNF486Q96H40 463 aaPredicted RBP11.14□□□□□ -0.63
SCLT1-201ENST00000281142 ZNF300Q96RE9 604 aaPredicted RBP11.14□□□□□ -0.63
SCLT1-201ENST00000281142 GAD1Q99259 594 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 ACTR8Q9H981 624 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 ARNT2Q9HBZ2 717 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 TMLHEQ9NVH6 421 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 NAALAD2Q9Y3Q0 740 aa11.14□□□□□ -0.63
SCLT1-201ENST00000281142 ARL5CA6NH57 179 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 ANGPTL1O95841 491 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 MT-ND2P03891 347 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 RPS17P08708 135 aaKnown RBP11.13□□□□□ -0.63
SCLT1-201ENST00000281142 ATXN1LP0C7T5 689 aaKnown RBP11.13□□□□□ -0.63
SCLT1-201ENST00000281142 KCNE1P15382 129 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 DCTP40126 519 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 CDKN1CP49918 316 aaPredicted RBP11.13□□□□□ -0.63
SCLT1-201ENST00000281142 HK3P52790 923 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 ERVK-8P63133 956 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 TSPY1Q01534 308 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 ZNF33AQ06730 810 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 PRKG2Q13237 762 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 NPTX1Q15818 432 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 DGUOKQ16854 277 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 LRIT3Q3SXY7 679 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 XKR4Q5GH76 650 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 MANEALQ5VSG8 457 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 TMCO2Q7Z6W1 182 aaPredicted RBP11.13□□□□□ -0.63
SCLT1-201ENST00000281142 GALNT13Q8IUC8 556 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 PIK3C3Q8NEB9 887 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 RHBDF1Q96CC6 855 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 YIPF6Q96EC8 236 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 ASB2Q96Q27 587 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 SLIRPQ9GZT3 109 aaKnown RBP11.13□□□□□ -0.63
SCLT1-201ENST00000281142 RNF38Q9H0F5 515 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 RMND5AQ9H871 391 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 SP110Q9HB58 689 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 FBXO8Q9NRD0 319 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 MIOSQ9NXC5 875 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 DNAJB9Q9UBS3 223 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 CAB39Q9Y376 341 aaPredicted RBP11.13□□□□□ -0.63
SCLT1-201ENST00000281142 POLR3HQ9Y535 204 aaPredicted RBP11.13□□□□□ -0.63
SCLT1-201ENST00000281142 PCDHB14Q9Y5E9 798 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 E9PAM4 449 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 GSTA4O15217 222 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 IRAK2O43187 625 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 RHOBTB1O94844 696 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 MLYCDO95822 493 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 GLP2RO95838 553 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 EOMESO95936 686 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 CXCR2P25025 360 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 GTF2E2P29084 291 aaKnown RBP11.13□□□□□ -0.63
SCLT1-201ENST00000281142 SERPINB1P30740 379 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 ALDH7A1P49419 539 aaKnown RBP11.13□□□□□ -0.63
SCLT1-201ENST00000281142 PPIGQ13427 754 aaKnown RBP eCLIP11.13□□□□□ -0.63
SCLT1-201ENST00000281142 SPATS1Q496A3 300 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 CLLU1OSQ5K130 101 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 SPATC1Q76KD6 591 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms