RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 TC2NQ8N9U0 490 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 GALNT11Q8NCW6 608 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 PHC3Q8NDX5 983 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 OR52E1Q8NGJ3 308 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 PRR7Q8TB68 274 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 ACTL9Q8TC94 416 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 ZFPM2Q8WW38 1151 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 P3H4Q92791 437 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 INPP5DQ92835 1189 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 ITPKCQ96DU7 683 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 C19orf60Q96EN9 201 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 DNAJC1Q96KC8 554 aaKnown RBP8.68□□□□□ -1.02
TPM3-201ENST00000271850 TRAPPC9Q96Q05 1148 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 CDK15Q96Q40 435 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 VAT1Q99536 393 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 NLNQ9BYT8 704 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 ZFAND3Q9H8U3 227 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.68□□□□□ -1.022e-13■■□□□ 11.6
TPM3-201ENST00000271850 ACSL5Q9ULC5 683 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 ICKQ9UPZ9 632 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 PKP3Q9Y446 797 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 PRSS21Q9Y6M0 314 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 TTLL8A6PVC2 850 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 PJA2O43164 708 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 TMEM63AO94886 807 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 ZRANB2O95218 330 aaKnown RBP eCLIP8.67□□□□□ -1.02
TPM3-201ENST00000271850 SLC35G4P0C7Q5 338 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 MSL3P1P0C860 447 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 CBSLP0DN79 551 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 ITGAXP20702 1163 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 PEBP1P30086 187 aaKnown RBP8.67□□□□□ -1.02
TPM3-201ENST00000271850 CBSP35520 551 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 PGDP52209 483 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 RPS15P62841 145 aaKnown RBP8.67□□□□□ -1.02
TPM3-201ENST00000271850 OTUD4Q01804 1114 aaKnown RBP8.67□□□□□ -1.02
TPM3-201ENST00000271850 RAPSNQ13702 412 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 INPP5JQ15735 1006 aaPredicted RBP8.67□□□□□ -1.02
TPM3-201ENST00000271850 DEFB110Q30KQ9 67 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 CRB2Q5IJ48 1285 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 ANKRD20A2Q5SQ80 823 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 ANKRD20A1Q5TYW2 823 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 ANKRD20A3Q5VUR7 823 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 DESI1Q6ICB0 168 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 C11orf63Q6NUN7 778 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 KLHL35Q6PF15 583 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 BZW1Q7L1Q6 419 aaKnown RBP8.67□□□□□ -1.02
TPM3-201ENST00000271850 TRIM73Q86UV7 250 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 ATCAYQ86WG3 371 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 CARFQ8N187 725 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 ACVR1CQ8NER5 493 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 OR8K5Q8NH50 307 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 CCDC110Q8TBZ0 833 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 HM13Q8TCT9 377 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 ALG3Q92685 438 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 TCTN2Q96GX1 697 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 RANBP9Q96S59 729 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 SMAD5Q99717 465 aaKnown RBP8.67□□□□□ -1.02
TPM3-201ENST00000271850 FSD1LQ9BXM9 530 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 ARNT2Q9HBZ2 717 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 ACSS2Q9NR19 701 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 C1GALT1Q9NS00 363 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 SOHLH2Q9NX45 425 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 SPHK1Q9NYA1 384 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 PLEKHB1Q9UF11 243 aaPredicted RBP8.67□□□□□ -1.02
TPM3-201ENST00000271850 TRHDEQ9UKU6 1024 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 PIKFYVEQ9Y2I7 2098 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 REXO2Q9Y3B8 237 aaKnown RBP8.67□□□□□ -1.02
TPM3-201ENST00000271850 DUSP10Q9Y6W6 482 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 CSMD2Q7Z408 3487 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 LRBAP50851 2863 aa8.67□□□□□ -1.02
TPM3-201ENST00000271850 C17orf113A0A1B0GUU1 675 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 CCDC66A2RUB6 948 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 GSAPA4D1B5 854 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 C5orf60A6NFR6 353 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 H7C0C1 242 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 H7C0S8 307 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 ZNF185O15231 689 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 ZNF749O43361 778 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 KRT86O43790 486 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 CLDN1O95832 211 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 ATP1B2P14415 290 aaPredicted RBP8.66□□□□□ -1.02
TPM3-201ENST00000271850 CDH3P22223 829 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 ACRV1P26436 265 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 COL8A1P27658 744 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 ACADLP28330 430 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 MC4RP32245 332 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 CTNNA1P35221 906 aaKnown RBP8.66□□□□□ -1.02
TPM3-201ENST00000271850 MAGEA1P43355 309 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 ATP5OP48047 213 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 VAV2P52735 878 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 GEMP55040 296 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 GDF10P55107 478 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 GSDMDP57764 484 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 PRKG2Q13237 762 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 BOP1Q14137 746 aaKnown RBP8.66□□□□□ -1.02
TPM3-201ENST00000271850 NCF4Q15080 339 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 DBN1Q16643 649 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 EIF2S3LQ2VIR3 472 aaKnown RBP8.66□□□□□ -1.02
TPM3-201ENST00000271850 C4orf17Q53FE4 359 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 CYB5D1Q6P9G0 228 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms