RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 SERPINA1P01009 418 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 SERPINF2P08697 491 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 HOXD8P13378 290 aaPredicted RBP12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 NCF1P14598 390 aaPredicted RBP12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 FMO4P31512 558 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 ARL1P40616 181 aaPredicted RBP12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 CTSKP43235 329 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 MLLT6P55198 1093 aaPredicted RBP12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 MAD2L1BPQ15013 274 aaPredicted RBP12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 KIAA0040Q15053 153 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 GJC2Q5T442 439 aaPredicted RBP12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 KDM4DQ6B0I6 523 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 CES5AQ6NT32 575 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 TAPT1Q6NXT6 567 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 TMC5Q6UXY8 1006 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 RNF19BQ6ZMZ0 732 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 GALNT5Q7Z7M9 940 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 METTL4Q8N3J2 472 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 ASCC1Q8N9N2 400 aaKnown RBP12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 TTC29Q8NA56 475 aaPredicted RBP12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 RPL3LQ92901 407 aaKnown RBP12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 FAM120BQ96EK7 910 aaKnown RBP12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 TBCDQ9BTW9 1192 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 DPY30Q9C005 99 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 CEP44Q9C0F1 390 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 NDRG4Q9ULP0 352 aaKnown RBP12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 SAMD4AQ9UPU9 718 aaKnown RBP12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 FAM50BQ9Y247 325 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 WBP11Q9Y2W2 641 aaKnown RBP12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 GRIP1Q9Y3R0 1128 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 POLR3HQ9Y535 204 aaPredicted RBP12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 SMIM35A0A1B0GVV1 85 aa12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 ENPP3O14638 875 aa12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 RHOQP17081 205 aa12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 CD9P21926 228 aa12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 MAGEA2P43356 314 aa12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 CLK3P49761 638 aaKnown RBP12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 ERVPABLB-1P60509 514 aa12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 IL2P60568 153 aa12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 SLC10A7Q0GE19 358 aa12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 ELP6Q0PNE2 266 aa12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 SEMA3AQ14563 771 aa12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 FBXO43Q4G163 708 aa12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 CACHD1Q5VU97 1274 aa12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 ZDHHC21Q8IVQ6 265 aa12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 SYTL1Q8IYJ3 562 aa12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 PARP16Q8N5Y8 322 aa12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 Q8N9G6 341 aaPredicted RBP12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 IL17RDQ8NFM7 739 aa12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 TRIM63Q969Q1 353 aa12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 TMEM30AQ9NV96 361 aa12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 C1orf109Q9NX04 203 aa12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 NUDT4Q9NZJ9 180 aa12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 MPP6Q9NZW5 540 aa12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 EIF2B4Q9UI10 523 aaKnown RBP12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 TRMT6Q9UJA5 497 aaKnown RBP12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 RNF6Q9Y252 685 aa12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 NEUROG3Q9Y4Z2 214 aa12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 CSADQ9Y600 493 aa12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 U3KQV3 271 aa12.15□□□□□ -0.46
CHMP2B-201ENST00000263780 KMOO15229 486 aa12.15□□□□□ -0.47
CHMP2B-201ENST00000263780 RGS14O43566 566 aa12.15□□□□□ -0.47
CHMP2B-201ENST00000263780 ERN1O75460 977 aaKnown RBP12.15□□□□□ -0.47
CHMP2B-201ENST00000263780 CAPN1P07384 714 aa12.15□□□□□ -0.47
CHMP2B-201ENST00000263780 SLC2A4P14672 509 aa12.15□□□□□ -0.47
CHMP2B-201ENST00000263780 DNAJA1P31689 397 aaKnown RBP12.15□□□□□ -0.47
CHMP2B-201ENST00000263780 PLIN5Q00G26 463 aa12.15□□□□□ -0.47
CHMP2B-201ENST00000263780 IL1RL1Q01638 556 aa12.15□□□□□ -0.47
CHMP2B-201ENST00000263780 VGLL4Q14135 290 aa12.15□□□□□ -0.47
CHMP2B-201ENST00000263780 DDR2Q16832 855 aa12.15□□□□□ -0.47
CHMP2B-201ENST00000263780 SPANXN2Q5MJ10 180 aa12.15□□□□□ -0.47
CHMP2B-201ENST00000263780 UBXN11Q5T124 520 aa12.15□□□□□ -0.47
CHMP2B-201ENST00000263780 KIAA1614Q5VZ46 1190 aa12.15□□□□□ -0.47
CHMP2B-201ENST00000263780 OR2T5Q6IEZ7 315 aa12.15□□□□□ -0.47
CHMP2B-201ENST00000263780 AFTPHQ6ULP2 937 aa12.15□□□□□ -0.47
CHMP2B-201ENST00000263780 CYP4Z1Q86W10 505 aa12.15□□□□□ -0.47
CHMP2B-201ENST00000263780 SIMC1Q8NDZ2 872 aa12.15□□□□□ -0.47
CHMP2B-201ENST00000263780 OR2T29Q8NH02 315 aa12.15□□□□□ -0.47
CHMP2B-201ENST00000263780 MYDGFQ969H8 173 aa12.15□□□□□ -0.47
CHMP2B-201ENST00000263780 PDLIM5Q96HC4 596 aaKnown RBP12.15□□□□□ -0.47
CHMP2B-201ENST00000263780 CEP295NLQ96MC4 621 aa12.15□□□□□ -0.47
CHMP2B-201ENST00000263780 GPR21Q99679 349 aa12.15□□□□□ -0.47
CHMP2B-201ENST00000263780 CCDC32Q9BV29 185 aa12.15□□□□□ -0.47
CHMP2B-201ENST00000263780 NUAK2Q9H093 628 aa12.15□□□□□ -0.47
CHMP2B-201ENST00000263780 IPPQ9Y573 584 aa12.15□□□□□ -0.47
CHMP2B-201ENST00000263780 HS3ST4Q9Y661 456 aa12.15□□□□□ -0.47
CHMP2B-201ENST00000263780 ARL5AQ9Y689 179 aa12.15□□□□□ -0.47
CHMP2B-201ENST00000263780 GJA3Q9Y6H8 435 aa12.15□□□□□ -0.47
CHMP2B-201ENST00000263780 CENPXA8MT69 81 aa12.14□□□□□ -0.47
CHMP2B-201ENST00000263780 SLC28A1O00337 649 aa12.14□□□□□ -0.47
CHMP2B-201ENST00000263780 MITFO75030 526 aaPredicted RBP12.14□□□□□ -0.47
CHMP2B-201ENST00000263780 USP2O75604 605 aaPredicted RBP12.14□□□□□ -0.47
CHMP2B-201ENST00000263780 PGLSO95336 258 aa12.14□□□□□ -0.47
CHMP2B-201ENST00000263780 OTCP00480 354 aa12.14□□□□□ -0.47
CHMP2B-201ENST00000263780 RPLP0P05388 317 aaKnown RBP12.14□□□□□ -0.47
CHMP2B-201ENST00000263780 SPNP16150 400 aa12.14□□□□□ -0.47
CHMP2B-201ENST00000263780 FPR1P21462 350 aa12.14□□□□□ -0.47
CHMP2B-201ENST00000263780 SOX6P35712 828 aa12.14□□□□□ -0.47
CHMP2B-201ENST00000263780 PBX3P40426 434 aa12.14□□□□□ -0.47
CHMP2B-201ENST00000263780 OR2B6P58173 313 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms