RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 EPHA2P29317 976 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 AQP1P29972 269 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 CDKN2CP42773 168 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 VBP1P61758 197 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 ARF5P84085 180 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 OCA2Q04671 838 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 FOXM1Q08050 763 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 PWP1Q13610 501 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 DDX39BQ13838 428 aaKnown RBP8.95□□□□□ -0.98
MSH4-201ENST00000263187 TAF12Q16514 161 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 ZNF829Q3KNS6 432 aaPredicted RBP8.95□□□□□ -0.98
MSH4-201ENST00000263187 TXNDC11Q6PKC3 985 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 RFLNAQ6ZTI6 216 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 USP51Q70EK9 711 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 MSRB3Q8IXL7 192 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 RGL4Q8IZJ4 473 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 CHDHQ8NE62 594 aaPredicted RBP8.95□□□□□ -0.98
MSH4-201ENST00000263187 GTF2H4Q92759 462 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 BORCS5Q969J3 196 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 ZBTB18Q99592 522 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 CLPBQ9H078 707 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 VNN3Q9NY84 501 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 ZIM2Q9NZV7 527 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 TMEM247A6NEH6 219 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 STX16O14662 325 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 COCHO43405 550 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 BCAS1O75363 584 aaPredicted RBP8.95□□□□□ -0.98
MSH4-201ENST00000263187 ULK1O75385 1050 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 MTX2O75431 263 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 EPOP01588 193 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 PGRP06401 933 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 SLC11A2P49281 568 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 CAP1Q01518 475 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 PRKCZQ05513 592 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 SLC14A1Q13336 389 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 C6orf141Q5SZD1 244 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 WFDC5Q8TCV5 224 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 GLMNQ92990 594 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 ISG20Q96AZ6 181 aaKnown RBP8.95□□□□□ -0.98
MSH4-201ENST00000263187 COX4I2Q96KJ9 171 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 ZNF382Q96SR6 550 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 DPH2Q9BQC3 489 aaPredicted RBP8.95□□□□□ -0.98
MSH4-201ENST00000263187 ALOXE3Q9BYJ1 711 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 ERVK-18Q9QC07 812 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 DLGAP4Q9Y2H0 992 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 PCDHB14Q9Y5E9 798 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 ELOVL7A1L3X0 281 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 SLC38A8A6NNN8 435 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 UMPSP11172 480 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 CKBP12277 381 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 OR1D2P34982 312 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 IDUAP35475 653 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 MAPKAPK2P49137 400 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 PHC1P78364 1004 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 TRAF3Q13114 568 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 PLD1Q13393 1074 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 RAPSNQ13702 412 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 PON2Q15165 354 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 CES5AQ6NT32 575 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 C17orf99Q6UX52 265 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 SLC24A5Q71RS6 500 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 IGFN1Q86VF2 1251 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 CROCCP3Q8IVE0 287 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 NDNFQ8TB73 568 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 UROC1Q96N76 676 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 NUSAP1Q9BXS6 441 aaKnown RBP8.94□□□□□ -0.98
MSH4-201ENST00000263187 ADGRE3Q9BY15 652 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 MIR1-1HGQ9H1L0 117 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 RAD21L1Q9H4I0 556 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 POPDC3Q9HBV1 291 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 SACM1LQ9NTJ5 587 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 OPTCQ9UBM4 332 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 DNMT3LQ9UJW3 386 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 RBMX2Q9Y388 322 aaKnown RBP8.94□□□□□ -0.98
MSH4-201ENST00000263187 ZNF451Q9Y4E5 1061 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 NEUROG3Q9Y4Z2 214 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 SNX5Q9Y5X3 404 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 GMEB1Q9Y692 573 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 LOC100130705A0A1B0GUX0 176 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 FUOMA2VDF0 154 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 H3BNC9 293 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 PRMT5O14744 637 aaPredicted RBP8.94□□□□□ -0.98
MSH4-201ENST00000263187 ANKRD28O15084 1053 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 TBL1XO60907 577 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 FADS2O95864 444 aaKnown RBP8.94□□□□□ -0.98
MSH4-201ENST00000263187 PSMB9P28065 219 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 AKT1P31749 480 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 SLC11A1P49279 550 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 HSPA14Q0VDF9 509 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 LAIR2Q6ISS4 152 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 Q6ZPB1 254 aaPredicted RBP8.94□□□□□ -0.98
MSH4-201ENST00000263187 PRR23BQ6ZRT6 265 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 VTCN1Q7Z7D3 282 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 TSPAN33Q86UF1 283 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 PDPRQ8NCN5 879 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 MYLIPQ8WY64 445 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 FAM120BQ96EK7 910 aaKnown RBP8.94□□□□□ -0.98
MSH4-201ENST00000263187 MAGEH1Q9H213 219 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 GPRC5BQ9NZH0 403 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 CD84Q9UIB8 345 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms