RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 INTS10Q9NVR2 710 aaKnown RBP12.78□□□□□ -0.36
TMEM260-201ENST00000261556 DUS2Q9NX74 493 aaKnown RBP12.78□□□□□ -0.36
TMEM260-201ENST00000261556 BTRCQ9Y297 605 aa12.78□□□□□ -0.36
TMEM260-201ENST00000261556 A0A0B4J203 849 aa12.78□□□□□ -0.36
TMEM260-201ENST00000261556 ACOX3O15254 700 aa12.78□□□□□ -0.36
TMEM260-201ENST00000261556 TXNL1O43396 289 aa12.78□□□□□ -0.36
TMEM260-201ENST00000261556 ACADLP28330 430 aa12.78□□□□□ -0.36
TMEM260-201ENST00000261556 NUDT6P53370 316 aa12.78□□□□□ -0.36
TMEM260-201ENST00000261556 ERVK-25P63136 954 aa12.78□□□□□ -0.36
TMEM260-201ENST00000261556 CSTF1Q05048 431 aaKnown RBP12.78□□□□□ -0.36
TMEM260-201ENST00000261556 RABL3Q5HYI8 236 aa12.78□□□□□ -0.36
TMEM260-201ENST00000261556 EEF1DP3Q658K8 133 aa12.78□□□□□ -0.36
TMEM260-201ENST00000261556 ALKBH2Q6NS38 261 aa12.78□□□□□ -0.36
TMEM260-201ENST00000261556 FIP1L1Q6UN15 594 aaKnown RBP12.78□□□□□ -0.36
TMEM260-201ENST00000261556 SYVN1Q86TM6 617 aa12.78□□□□□ -0.36
TMEM260-201ENST00000261556 ANKRD52Q8NB46 1076 aa12.78□□□□□ -0.36
TMEM260-201ENST00000261556 WDR36Q8NI36 951 aaKnown RBP12.78□□□□□ -0.36
TMEM260-201ENST00000261556 DNAJA4Q8WW22 397 aaPredicted RBP12.78□□□□□ -0.36
TMEM260-201ENST00000261556 TP53INP1Q96A56 240 aa12.78□□□□□ -0.36
TMEM260-201ENST00000261556 PFDN5Q99471 154 aa12.78□□□□□ -0.36
TMEM260-201ENST00000261556 CCM2LQ9NUG4 571 aaPredicted RBP12.78□□□□□ -0.36
TMEM260-201ENST00000261556 NLKQ9UBE8 527 aa12.78□□□□□ -0.36
TMEM260-201ENST00000261556 MAB21L2Q9Y586 359 aa12.78□□□□□ -0.36
TMEM260-201ENST00000261556 C2orf81A6NN90 581 aa12.77□□□□□ -0.36
TMEM260-201ENST00000261556 SPATA31C1P0DKV0 1188 aa12.77□□□□□ -0.36
TMEM260-201ENST00000261556 ZBTB48P10074 688 aaPredicted RBP12.77□□□□□ -0.36
TMEM260-201ENST00000261556 PRKAR2AP13861 404 aaKnown RBP12.77□□□□□ -0.36
TMEM260-201ENST00000261556 OXTRP30559 389 aa12.77□□□□□ -0.36
TMEM260-201ENST00000261556 GTF2BQ00403 316 aa12.77□□□□□ -0.36
TMEM260-201ENST00000261556 SMCO1Q147U7 214 aa12.77□□□□□ -0.36
TMEM260-201ENST00000261556 HSF5Q4G112 596 aaPredicted RBP12.77□□□□□ -0.36
TMEM260-201ENST00000261556 ILDR2Q71H61 639 aa12.77□□□□□ -0.36
TMEM260-201ENST00000261556 RIPOR3Q96MK2 946 aa12.77□□□□□ -0.36
TMEM260-201ENST00000261556 BARD1Q99728 777 aaKnown RBP12.77□□□□□ -0.36
TMEM260-201ENST00000261556 ERVK-6Q9BXR3 956 aa12.77□□□□□ -0.36
TMEM260-201ENST00000261556 CDT1Q9H211 546 aa12.77□□□□□ -0.36
TMEM260-201ENST00000261556 MCUBQ9NWR8 336 aa12.77□□□□□ -0.36
TMEM260-201ENST00000261556 DUSP12Q9UNI6 340 aa12.77□□□□□ -0.36
TMEM260-201ENST00000261556 AQP12BA6NM10 295 aa12.77□□□□□ -0.37
TMEM260-201ENST00000261556 CTDSP2O14595 271 aa12.77□□□□□ -0.37
TMEM260-201ENST00000261556 SEC14L2O76054 403 aa12.77□□□□□ -0.37
TMEM260-201ENST00000261556 MICAL2O94851 1124 aa12.77□□□□□ -0.37
TMEM260-201ENST00000261556 ITGA2P17301 1181 aa12.77□□□□□ -0.37
TMEM260-201ENST00000261556 IGFBP5P24593 272 aa12.77□□□□□ -0.37
TMEM260-201ENST00000261556 CYP2F1P24903 491 aa12.77□□□□□ -0.37
TMEM260-201ENST00000261556 SLC10A2Q12908 348 aaPredicted RBP12.77□□□□□ -0.37
TMEM260-201ENST00000261556 BRMS1LQ5PSV4 323 aa12.77□□□□□ -0.37
TMEM260-201ENST00000261556 AQP12AQ8IXF9 295 aa12.77□□□□□ -0.37
TMEM260-201ENST00000261556 PM20D2Q8IYS1 436 aa12.77□□□□□ -0.37
TMEM260-201ENST00000261556 ZNF557Q8N988 423 aaPredicted RBP12.77□□□□□ -0.37
TMEM260-201ENST00000261556 OR10Q1Q8NGQ4 319 aa12.77□□□□□ -0.37
TMEM260-201ENST00000261556 FAM110BQ8TC76 370 aa12.77□□□□□ -0.37
TMEM260-201ENST00000261556 TRIM43Q96BQ3 446 aaPredicted RBP12.77□□□□□ -0.37
TMEM260-201ENST00000261556 ZNF778Q96MU6 729 aa12.77□□□□□ -0.37
TMEM260-201ENST00000261556 FBXO44Q9H4M3 255 aa12.77□□□□□ -0.37
TMEM260-201ENST00000261556 CNTN3Q9P232 1028 aa12.77□□□□□ -0.37
TMEM260-201ENST00000261556 AAR2Q9Y312 384 aaKnown RBP12.77□□□□□ -0.37
TMEM260-201ENST00000261556 PCDHA11Q9Y5I1 949 aa12.77□□□□□ -0.37
TMEM260-201ENST00000261556 SPATA31C2B4DYI2 1134 aa12.77□□□□□ -0.37
TMEM260-201ENST00000261556 MTA2O94776 668 aa12.77□□□□□ -0.37
TMEM260-201ENST00000261556 HMGCRP04035 888 aa12.77□□□□□ -0.37
TMEM260-201ENST00000261556 SRCP12931 536 aa12.77□□□□□ -0.37
TMEM260-201ENST00000261556 CDKN2BP42772 138 aa12.77□□□□□ -0.37
TMEM260-201ENST00000261556 RHOAP61586 193 aa12.77□□□□□ -0.37
TMEM260-201ENST00000261556 PAN3Q58A45 887 aaKnown RBP12.77□□□□□ -0.37
TMEM260-201ENST00000261556 WSCD1Q658N2 575 aa12.77□□□□□ -0.37
TMEM260-201ENST00000261556 RPS27LQ71UM5 84 aaKnown RBP12.77□□□□□ -0.37
TMEM260-201ENST00000261556 FAM126BQ8IXS8 530 aa12.77□□□□□ -0.37
TMEM260-201ENST00000261556 ACTL7AQ9Y615 435 aa12.77□□□□□ -0.37
TMEM260-201ENST00000261556 LOC100130705A0A1B0GUX0 176 aa12.76□□□□□ -0.37
TMEM260-201ENST00000261556 TSPAN3O60637 253 aa12.76□□□□□ -0.37
TMEM260-201ENST00000261556 DHFRP00374 187 aa12.76□□□□□ -0.37
TMEM260-201ENST00000261556 ADRB2P07550 413 aa12.76□□□□□ -0.37
TMEM260-201ENST00000261556 YWHAQP27348 245 aa12.76□□□□□ -0.37
TMEM260-201ENST00000261556 LBX2Q6XYB7 198 aa12.76□□□□□ -0.37
TMEM260-201ENST00000261556 ASB18Q6ZVZ8 466 aa12.76□□□□□ -0.37
TMEM260-201ENST00000261556 TMPRSS9Q7Z410 1059 aa12.76□□□□□ -0.37
TMEM260-201ENST00000261556 ZNF605Q86T29 641 aa12.76□□□□□ -0.37
TMEM260-201ENST00000261556 PLD5Q8N7P1 536 aa12.76□□□□□ -0.37
TMEM260-201ENST00000261556 S100PBPQ96BU1 408 aa12.76□□□□□ -0.37
TMEM260-201ENST00000261556 OTUB1Q96FW1 271 aaPredicted RBP12.76□□□□□ -0.37
TMEM260-201ENST00000261556 TMEM74Q96NL1 305 aa12.76□□□□□ -0.37
TMEM260-201ENST00000261556 WACQ9BTA9 647 aa12.76□□□□□ -0.37
TMEM260-201ENST00000261556 ZNF556Q9HAH1 456 aa12.76□□□□□ -0.37
TMEM260-201ENST00000261556 FBRSL1Q9HCM7 1045 aaKnown RBP12.76□□□□□ -0.37
TMEM260-201ENST00000261556 TLR8Q9NR97 1041 aaKnown RBP12.76□□□□□ -0.37
TMEM260-201ENST00000261556 POLG2Q9UHN1 485 aa12.76□□□□□ -0.37
TMEM260-201ENST00000261556 IKZF3Q9UKT9 509 aa12.76□□□□□ -0.37
TMEM260-201ENST00000261556 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.76□□□□□ -0.37
TMEM260-201ENST00000261556 NEMP2A6NFY4 417 aa12.76□□□□□ -0.37
TMEM260-201ENST00000261556 M0R233 179 aa12.76□□□□□ -0.37
TMEM260-201ENST00000261556 SLC1A7O00341 560 aa12.76□□□□□ -0.37
TMEM260-201ENST00000261556 BTN3A1O00481 513 aa12.76□□□□□ -0.37
TMEM260-201ENST00000261556 ENPP3O14638 875 aa12.76□□□□□ -0.37
TMEM260-201ENST00000261556 B4GALT5O43286 388 aa12.76□□□□□ -0.37
TMEM260-201ENST00000261556 OAZ2O95190 189 aa12.76□□□□□ -0.37
TMEM260-201ENST00000261556 NFICP08651 508 aa12.76□□□□□ -0.37
TMEM260-201ENST00000261556 CBR1P16152 277 aa12.76□□□□□ -0.37
TMEM260-201ENST00000261556 CA5AP35218 305 aa12.76□□□□□ -0.37
TMEM260-201ENST00000261556 NRG1Q02297 640 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms