RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 CCNI2Q6ZMN8 369 aaPredicted RBP4.7□□□□□ -1.66
TRA2B-201ENST00000259043 G2E3Q7L622 706 aa4.7□□□□□ -1.66
TRA2B-201ENST00000259043 TAOK1Q7L7X3 1001 aa4.7□□□□□ -1.66
TRA2B-201ENST00000259043 CIARTQ8N365 385 aaPredicted RBP4.7□□□□□ -1.66
TRA2B-201ENST00000259043 ZCCHC9Q8N567 271 aaKnown RBP4.7□□□□□ -1.66
TRA2B-201ENST00000259043 PI4KAP1Q8N8J0 262 aa4.7□□□□□ -1.66
TRA2B-201ENST00000259043 HUS1BQ8NHY5 278 aa4.7□□□□□ -1.66
TRA2B-201ENST00000259043 GTF3C6Q969F1 213 aa4.7□□□□□ -1.66
TRA2B-201ENST00000259043 PGAM5Q96HS1 289 aa4.7□□□□□ -1.66
TRA2B-201ENST00000259043 PARK7Q99497 189 aaKnown RBP4.7□□□□□ -1.66
TRA2B-201ENST00000259043 KXD1Q9BQD3 176 aa4.7□□□□□ -1.66
TRA2B-201ENST00000259043 AP1M1Q9BXS5 423 aa4.7□□□□□ -1.66
TRA2B-201ENST00000259043 TEX12Q9BXU0 123 aa4.7□□□□□ -1.66
TRA2B-201ENST00000259043 MMP28Q9H239 520 aa4.7□□□□□ -1.66
TRA2B-201ENST00000259043 MCM9Q9NXL9 1143 aa4.7□□□□□ -1.66
TRA2B-201ENST00000259043 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.7□□□□□ -1.66
TRA2B-201ENST00000259043 MORF4L1Q9UBU8 362 aa4.7□□□□□ -1.66
TRA2B-201ENST00000259043 CHORDC1Q9UHD1 332 aaPredicted RBP4.7□□□□□ -1.66
TRA2B-201ENST00000259043 INTS6Q9UL03 887 aaKnown RBP4.7□□□□□ -1.66
TRA2B-201ENST00000259043 VDAC3Q9Y277 283 aa4.7□□□□□ -1.66
TRA2B-201ENST00000259043 SESN1Q9Y6P5 492 aa4.7□□□□□ -1.66
TRA2B-201ENST00000259043 RLFQ13129 1914 aa4.7□□□□□ -1.66
TRA2B-201ENST00000259043 MYO9BQ13459 2157 aa4.7□□□□□ -1.66
TRA2B-201ENST00000259043 CXCL11O14625 94 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 SCAMP1O15126 338 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 LMX1BO60663 402 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 DKC1O60832 514 aaKnown RBP eCLIP4.69□□□□□ -1.66
TRA2B-201ENST00000259043 DNTTP04053 509 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 SAT1P21673 171 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 GCH1P30793 250 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 ACSL1P33121 698 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 EIF2DP41214 584 aaKnown RBP4.69□□□□□ -1.66
TRA2B-201ENST00000259043 CDH8P55286 799 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 RELQ04864 619 aaPredicted RBP4.69□□□□□ -1.66
TRA2B-201ENST00000259043 OLIG2Q13516 323 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 FRG1Q14331 258 aaKnown RBP4.69□□□□□ -1.66
TRA2B-201ENST00000259043 GCKRQ14397 625 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 PPP2R5BQ15173 497 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 RBBP5Q15291 538 aaKnown RBP4.69□□□□□ -1.66
TRA2B-201ENST00000259043 SHHQ15465 462 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 STPG1Q5TH74 334 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 FKBP1CQ5VVH2 108 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 NAA16Q6N069 864 aaPredicted RBP4.69□□□□□ -1.66
TRA2B-201ENST00000259043 TSSK4Q6SA08 328 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 GFRALQ6UXV0 394 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 QSOX2Q6ZRP7 698 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 CHST9Q7L1S5 443 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 SFR1Q86XK3 245 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 DCUN1D3Q8IWE4 304 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 ODF3L1Q8IXM7 274 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 TEX11Q8IYF3 940 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 ANKRD13CQ8N6S4 541 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 LMNTD1Q8N9Z9 388 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 SGCDQ92629 289 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 PABPC5Q96DU9 382 aaKnown RBP4.69□□□□□ -1.66
TRA2B-201ENST00000259043 SLC41A2Q96JW4 573 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 BAG1Q99933 345 aaPredicted RBP4.69□□□□□ -1.66
TRA2B-201ENST00000259043 TXLNGYQ9BZA5 131 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 CSTL1Q9H114 145 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 PNNQ9H307 717 aaKnown RBP4.69□□□□□ -1.66
TRA2B-201ENST00000259043 BPIFA1Q9NP55 256 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 ASAH2Q9NR71 780 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 TMEM30AQ9NV96 361 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 NFKBIL1Q9UBC1 381 aaPredicted RBP4.69□□□□□ -1.66
TRA2B-201ENST00000259043 MKLN1Q9UL63 735 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 CAPN7Q9Y6W3 813 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 XIRP2A4UGR9 3374 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 UTYO14607 1347 aa4.69□□□□□ -1.66
TRA2B-201ENST00000259043 PDS5AQ29RF7 1337 aaKnown RBP4.69□□□□□ -1.66
TRA2B-201ENST00000259043 A0A1W2PRQ8 180 aa4.68□□□□□ -1.66
TRA2B-201ENST00000259043 FRMD3A2A2Y4 597 aa4.68□□□□□ -1.66
TRA2B-201ENST00000259043 SERINC4A6NH21 518 aa4.68□□□□□ -1.66
TRA2B-201ENST00000259043 NDUFS3O75489 264 aa4.68□□□□□ -1.66
TRA2B-201ENST00000259043 FTCDO95954 541 aa4.68□□□□□ -1.66
TRA2B-201ENST00000259043 CLTBP09497 229 aa4.68□□□□□ -1.66
TRA2B-201ENST00000259043 FOSL2P15408 326 aa4.68□□□□□ -1.66
TRA2B-201ENST00000259043 DDX5P17844 614 aaKnown RBP4.68□□□□□ -1.66
TRA2B-201ENST00000259043 S1PR1P21453 382 aa4.68□□□□□ -1.66
TRA2B-201ENST00000259043 CCND3P30281 292 aaPredicted RBP4.68□□□□□ -1.66
TRA2B-201ENST00000259043 CDAP32320 146 aa4.68□□□□□ -1.66
TRA2B-201ENST00000259043 LMAN1P49257 510 aa4.68□□□□□ -1.66
TRA2B-201ENST00000259043 METAP2P50579 478 aaKnown RBP eCLIP4.68□□□□□ -1.66
TRA2B-201ENST00000259043 HNRNPH2P55795 449 aaKnown RBP4.68□□□□□ -1.66
TRA2B-201ENST00000259043 IFI35P80217 286 aaPredicted RBP4.68□□□□□ -1.66
TRA2B-201ENST00000259043 LRMPQ12912 555 aa4.68□□□□□ -1.66
TRA2B-201ENST00000259043 PRPF4BQ13523 1007 aaKnown RBP4.68□□□□□ -1.66
TRA2B-201ENST00000259043 RAB41Q5JT25 222 aa4.68□□□□□ -1.66
TRA2B-201ENST00000259043 MARK2Q7KZI7 788 aaKnown RBP4.68□□□□□ -1.66
TRA2B-201ENST00000259043 TMEM219Q86XT9 240 aa4.68□□□□□ -1.66
TRA2B-201ENST00000259043 WDR63Q8IWG1 891 aa4.68□□□□□ -1.66
TRA2B-201ENST00000259043 OR2AK2Q8NG84 335 aa4.68□□□□□ -1.66
TRA2B-201ENST00000259043 MAGEC3Q8TD91 643 aa4.68□□□□□ -1.66
TRA2B-201ENST00000259043 FAM151AQ8WW52 585 aa4.68□□□□□ -1.66
TRA2B-201ENST00000259043 PSPC1Q8WXF1 523 aaKnown RBP4.68□□□□□ -1.66
TRA2B-201ENST00000259043 PGLYRP2Q96PD5 576 aa4.68□□□□□ -1.66
TRA2B-201ENST00000259043 FAM110AQ9BQ89 295 aa4.68□□□□□ -1.66
TRA2B-201ENST00000259043 PUS3Q9BZE2 481 aaKnown RBP4.68□□□□□ -1.66
TRA2B-201ENST00000259043 SCPEP1Q9HB40 452 aa4.68□□□□□ -1.66
TRA2B-201ENST00000259043 SUCLA2Q9P2R7 463 aaPredicted RBP4.68□□□□□ -1.66
TRA2B-201ENST00000259043 AAR2Q9Y312 384 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms