RNA–Protein interactions for RNA: ENST00000259003.14

CSHL1-201, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-201ENST00000259003 HACD3Q9P035 362 aa12.24□□□□□ -0.45
CSHL1-201ENST00000259003 TFR2Q9UP52 801 aa12.24□□□□□ -0.45
CSHL1-201ENST00000259003 ICKQ9UPZ9 632 aa12.24□□□□□ -0.45
CSHL1-201ENST00000259003 CCDC168Q8NDH2 2452 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 E7EQ34 232 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 MBD3O95983 291 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 ZFXP17010 805 aaPredicted RBP12.23□□□□□ -0.45
CSHL1-201ENST00000259003 ITGAXP20702 1163 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 RBL1P28749 1068 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 PRLHRP49683 370 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 RRADP55042 308 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 SPARCL1Q14515 664 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 MYBPC3Q14896 1274 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 ZRANB3Q5FWF4 1079 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 DCAF10Q5QP82 559 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 ZDHHC20Q5W0Z9 365 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 VSIG1Q86XK7 387 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 RAB43Q86YS6 212 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 ZNF655Q8N720 491 aaPredicted RBP12.23□□□□□ -0.45
CSHL1-201ENST00000259003 AMER2Q8N7J2 671 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 HM13Q8TCT9 377 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 GBP5Q96PP8 586 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 BARD1Q99728 777 aaKnown RBP12.23□□□□□ -0.45
CSHL1-201ENST00000259003 FAM118BQ9BPY3 351 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 SLC7A5P2Q9GIP4 190 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 P4HTMQ9NXG6 502 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 C5AR2Q9P296 337 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 RSPH14Q9UHP6 348 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 SERTAD3Q9UJW9 196 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 PLAGL1Q9UM63 463 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 KLHL20Q9Y2M5 609 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 PCDHGA10Q9Y5H3 936 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 COPG1Q9Y678 874 aaKnown RBP12.23□□□□□ -0.45
CSHL1-201ENST00000259003 COLEC10Q9Y6Z7 277 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 ADGRG4Q8IZF6 3080 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 SCN3AQ9NY46 2000 aa12.23□□□□□ -0.45
CSHL1-201ENST00000259003 AKAP9Q99996 3911 aa12.22□□□□□ -0.45
CSHL1-201ENST00000259003 CCDC78A2IDD5 438 aa12.22□□□□□ -0.45
CSHL1-201ENST00000259003 AGAP14A8MT82 685 aa12.22□□□□□ -0.45
CSHL1-201ENST00000259003 C9J4A7 227 aa12.22□□□□□ -0.45
CSHL1-201ENST00000259003 E2F3O00716 465 aa12.22□□□□□ -0.45
CSHL1-201ENST00000259003 ATP1B2P14415 290 aaPredicted RBP12.22□□□□□ -0.45
CSHL1-201ENST00000259003 PSMB4P28070 264 aa12.22□□□□□ -0.45
CSHL1-201ENST00000259003 NDUFS1P28331 727 aa12.22□□□□□ -0.45
CSHL1-201ENST00000259003 PEBP1P30086 187 aaKnown RBP12.22□□□□□ -0.45
CSHL1-201ENST00000259003 ADRA1AP35348 466 aa12.22□□□□□ -0.45
CSHL1-201ENST00000259003 SRSF11Q05519 484 aaKnown RBP12.22□□□□□ -0.45
CSHL1-201ENST00000259003 MPP3Q13368 585 aa12.22□□□□□ -0.45
CSHL1-201ENST00000259003 SSPNQ14714 243 aa12.22□□□□□ -0.45
CSHL1-201ENST00000259003 BRD3Q15059 726 aa12.22□□□□□ -0.45
CSHL1-201ENST00000259003 TAF1AQ15573 450 aaPredicted RBP12.22□□□□□ -0.45
CSHL1-201ENST00000259003 LRRC38Q5VT99 294 aa12.22□□□□□ -0.45
CSHL1-201ENST00000259003 RANBP10Q6VN20 620 aa12.22□□□□□ -0.45
CSHL1-201ENST00000259003 Q6ZS92 163 aa12.22□□□□□ -0.45
CSHL1-201ENST00000259003 AMIGO1Q86WK6 493 aa12.22□□□□□ -0.45
CSHL1-201ENST00000259003 CCDC50Q8IVM0 306 aa12.22□□□□□ -0.45
CSHL1-201ENST00000259003 CARFQ8N187 725 aa12.22□□□□□ -0.45
CSHL1-201ENST00000259003 NXPE1Q8N323 547 aa12.22□□□□□ -0.45
CSHL1-201ENST00000259003 CLDN19Q8N6F1 224 aa12.22□□□□□ -0.45
CSHL1-201ENST00000259003 OR5AR1Q8NGP9 310 aa12.22□□□□□ -0.45
CSHL1-201ENST00000259003 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.22□□□□□ -0.45
CSHL1-201ENST00000259003 QKIQ96PU8 341 aaKnown RBP eCLIP12.22□□□□□ -0.45
CSHL1-201ENST00000259003 OR2A14Q96R47 310 aa12.22□□□□□ -0.45
CSHL1-201ENST00000259003 ILKAPQ9H0C8 392 aaPredicted RBP12.22□□□□□ -0.45
CSHL1-201ENST00000259003 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.22□□□□□ -0.45
CSHL1-201ENST00000259003 CRLS1Q9UJA2 301 aa12.22□□□□□ -0.45
CSHL1-201ENST00000259003 PRSS21Q9Y6M0 314 aa12.22□□□□□ -0.45
CSHL1-201ENST00000259003 hCG_1818297A0A087WSY0 165 aa12.21□□□□□ -0.45
CSHL1-201ENST00000259003 ARHGAP10A1A4S6 786 aa12.21□□□□□ -0.45
CSHL1-201ENST00000259003 SYCE3A1L190 88 aa12.21□□□□□ -0.45
CSHL1-201ENST00000259003 OR2B3O76000 313 aa12.21□□□□□ -0.45
CSHL1-201ENST00000259003 MSL3P1P0C860 447 aa12.21□□□□□ -0.45
CSHL1-201ENST00000259003 UGT2B7P16662 529 aa12.21□□□□□ -0.45
CSHL1-201ENST00000259003 AGXTP21549 392 aa12.21□□□□□ -0.45
CSHL1-201ENST00000259003 ARHGAP25P42331 645 aa12.21□□□□□ -0.45
CSHL1-201ENST00000259003 NR2C2P49116 596 aa12.21□□□□□ -0.45
CSHL1-201ENST00000259003 ZNF140P52738 457 aaPredicted RBP12.21□□□□□ -0.45
CSHL1-201ENST00000259003 BOP1Q14137 746 aaKnown RBP12.21□□□□□ -0.45
CSHL1-201ENST00000259003 DENND5AQ6IQ26 1287 aa12.21□□□□□ -0.45
CSHL1-201ENST00000259003 MRPL14Q6P1L8 145 aaKnown RBP12.21□□□□□ -0.45
CSHL1-201ENST00000259003 SPESP1Q6UW49 350 aa12.21□□□□□ -0.45
CSHL1-201ENST00000259003 IGFL3Q6UXB1 125 aa12.21□□□□□ -0.45
CSHL1-201ENST00000259003 UNC5AQ6ZN44 842 aa12.21□□□□□ -0.45
CSHL1-201ENST00000259003 KCNMB4Q86W47 210 aa12.21□□□□□ -0.45
CSHL1-201ENST00000259003 HPS6Q86YV9 775 aa12.21□□□□□ -0.45
CSHL1-201ENST00000259003 C19orf47Q8N9M1 422 aaKnown RBP12.21□□□□□ -0.45
CSHL1-201ENST00000259003 UBE2Q2Q8WVN8 375 aa12.21□□□□□ -0.45
CSHL1-201ENST00000259003 KRT35Q92764 455 aa12.21□□□□□ -0.45
CSHL1-201ENST00000259003 DNAJC1Q96KC8 554 aaKnown RBP12.21□□□□□ -0.45
CSHL1-201ENST00000259003 CCM2Q9BSQ5 444 aa12.21□□□□□ -0.45
CSHL1-201ENST00000259003 HEMGNQ9BXL5 484 aa12.21□□□□□ -0.45
CSHL1-201ENST00000259003 FSD1LQ9BXM9 530 aa12.21□□□□□ -0.45
CSHL1-201ENST00000259003 UNKQ9C0B0 810 aaKnown RBP12.21□□□□□ -0.45
CSHL1-201ENST00000259003 TFB2MQ9H5Q4 396 aaKnown RBP12.21□□□□□ -0.45
CSHL1-201ENST00000259003 G3BP2Q9UN86 482 aaKnown RBP12.21□□□□□ -0.45
CSHL1-201ENST00000259003 SRPK3Q9UPE1 567 aa12.21□□□□□ -0.45
CSHL1-201ENST00000259003 OSGIN2Q9Y236 505 aa12.21□□□□□ -0.45
CSHL1-201ENST00000259003 TACC2O95359 2948 aa12.21□□□□□ -0.46
CSHL1-201ENST00000259003 NCOA6Q14686 2063 aaPredicted RBP12.2□□□□□ -0.46
CSHL1-201ENST00000259003 LRRTM2O43300 516 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms