RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 CAMK1Q14012 370 aa7.62□□□□□ -1.19
GPNMB-201ENST00000258733 TOB2Q14106 344 aaPredicted RBP7.62□□□□□ -1.19
GPNMB-201ENST00000258733 BTBD16Q32M84 506 aa7.62□□□□□ -1.19
GPNMB-201ENST00000258733 PRR16Q569H4 304 aa7.62□□□□□ -1.19
GPNMB-201ENST00000258733 ARHGAP40Q5TG30 622 aa7.62□□□□□ -1.19
GPNMB-201ENST00000258733 RPUSD3Q6P087 351 aaKnown RBP7.62□□□□□ -1.19
GPNMB-201ENST00000258733 DARS2Q6PI48 645 aaKnown RBP7.62□□□□□ -1.19
GPNMB-201ENST00000258733 POTEGQ6S5H5 508 aa7.62□□□□□ -1.19
GPNMB-201ENST00000258733 KCNT2Q6UVM3 1135 aa7.62□□□□□ -1.19
GPNMB-201ENST00000258733 FRMD7Q6ZUT3 714 aa7.62□□□□□ -1.19
GPNMB-201ENST00000258733 CARM1Q86X55 608 aa7.62□□□□□ -1.19
GPNMB-201ENST00000258733 TCEAL8Q8IYN2 117 aa7.62□□□□□ -1.19
GPNMB-201ENST00000258733 FOXRED1Q96CU9 486 aaPredicted RBP7.62□□□□□ -1.19
GPNMB-201ENST00000258733 CMTM5Q96DZ9 223 aa7.62□□□□□ -1.19
GPNMB-201ENST00000258733 LINC00052Q96N35 136 aa7.62□□□□□ -1.19
GPNMB-201ENST00000258733 SMOQ99835 787 aa7.62□□□□□ -1.19
GPNMB-201ENST00000258733 CEP41Q9BYV8 373 aa7.62□□□□□ -1.19
GPNMB-201ENST00000258733 POLR1BQ9H9Y6 1135 aa7.62□□□□□ -1.19
GPNMB-201ENST00000258733 FBXO8Q9NRD0 319 aa7.62□□□□□ -1.19
GPNMB-201ENST00000258733 TAS2R3Q9NYW6 316 aa7.62□□□□□ -1.19
GPNMB-201ENST00000258733 COL20A1Q9P218 1284 aa7.62□□□□□ -1.19
GPNMB-201ENST00000258733 SLC23A1Q9UHI7 598 aa7.62□□□□□ -1.19
GPNMB-201ENST00000258733 SLCO3A1Q9UIG8 710 aa7.62□□□□□ -1.19
GPNMB-201ENST00000258733 TP53TG5Q9Y2B4 290 aa7.62□□□□□ -1.19
GPNMB-201ENST00000258733 TLR6Q9Y2C9 796 aa7.62□□□□□ -1.19
GPNMB-201ENST00000258733 PEX16Q9Y5Y5 336 aa7.62□□□□□ -1.19
GPNMB-201ENST00000258733 ATP10DQ9P241 1426 aa7.62□□□□□ -1.19
GPNMB-201ENST00000258733 PEAK1Q9H792 1746 aa7.62□□□□□ -1.19
GPNMB-201ENST00000258733 MYH14Q7Z406 1995 aaKnown RBP7.62□□□□□ -1.19
GPNMB-201ENST00000258733 MROH6A6NGR9 719 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 OR2AT4A6NND4 320 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 E5RI56 91 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 POC1B-GALNT4F8VUJ3 575 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 KHNYNO15037 678 aaKnown RBP7.61□□□□□ -1.19
GPNMB-201ENST00000258733 PSMD3O43242 534 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 AKR7A2O43488 359 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 SEC22BO75396 215 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 CCNE2O96020 404 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 ACVR2AP27037 513 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 MAP3K8P41279 467 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 DNA2P51530 1060 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 METAP1P53582 386 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 SEMA3BQ13214 749 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 PIN1Q13526 163 aaPredicted RBP7.61□□□□□ -1.19
GPNMB-201ENST00000258733 ZNF181Q2M3W8 571 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 PABPC1L2AQ5JQF8 200 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 ZDHHC20Q5W0Z9 365 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 NOTUMQ6P988 496 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 USP17L1Q7RTZ2 530 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 REC114Q7Z4M0 266 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 GALNT10Q86SR1 603 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 SEPT12Q8IYM1 358 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 SVOPLQ8N434 492 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 PNMA1Q8ND90 353 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 STAMQ92783 540 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 KIAA1191Q96A73 305 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 HMCESQ96FZ2 354 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 FYTTD1Q96QD9 318 aaKnown RBP7.61□□□□□ -1.19
GPNMB-201ENST00000258733 APOL2Q9BQE5 337 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 SPATA9Q9BWV2 254 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 EVA1AQ9H8M9 152 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 SPON1Q9HCB6 807 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 RANGRFQ9HD47 186 aaPredicted RBP7.61□□□□□ -1.19
GPNMB-201ENST00000258733 DDX4Q9NQI0 724 aaKnown RBP7.61□□□□□ -1.19
GPNMB-201ENST00000258733 NINJ2Q9NZG7 142 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 PPP4R1LQ9P1A2 415 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 PCYOX1Q9UHG3 505 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 KCND3Q9UK17 655 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 CA5BQ9Y2D0 317 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 XRN1Q8IZH2 1706 aaKnown RBP7.61□□□□□ -1.19
GPNMB-201ENST00000258733 BCL9LQ86UU0 1499 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 ARHGAP23Q9P227 1491 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 SPDYE2BA6NHP3 402 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 C22orf46C9J442 243 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 CD3EAPO15446 510 aaKnown RBP7.61□□□□□ -1.19
GPNMB-201ENST00000258733 TLL1O43897 1013 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 LPXNO60711 386 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 GGPS1O95749 300 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 RLN2P04090 185 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 SPDYE6P0CI01 402 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 EIF2DP41214 584 aaKnown RBP7.61□□□□□ -1.19
GPNMB-201ENST00000258733 PTGIRP43119 386 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 QARSP47897 775 aaKnown RBP7.61□□□□□ -1.19
GPNMB-201ENST00000258733 PRRX1P54821 245 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 PKNOX1P55347 436 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 PSME3P61289 254 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 SNRPD2P62316 118 aaKnown RBP7.61□□□□□ -1.19
GPNMB-201ENST00000258733 GTF2IP78347 998 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 SLC18A2Q05940 514 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 SLC5A12Q1EHB4 618 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 BMT2Q1RMZ1 405 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 GFOD2Q3B7J2 385 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 SPDYE2Q495Y8 402 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 FAM47AQ5JRC9 791 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 RPL13AP3Q6NVV1 102 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 RBMS3Q6XE24 437 aaKnown RBP7.61□□□□□ -1.19
GPNMB-201ENST00000258733 DHFR2Q86XF0 187 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 SLC41A1Q8IVJ1 513 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 ZSWIM2Q8NEG5 633 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 C22orf15Q8WYQ4 148 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms