RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 MNTQ99583 582 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 C1orf50Q9BV19 199 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 SLC25A23Q9BV35 468 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 ADI1Q9BV57 179 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 NUSAP1Q9BXS6 441 aaKnown RBP10.4□□□□□ -0.74
VPS18-201ENST00000220509 HCSTQ9UBK5 93 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 RIMS3Q9UJD0 308 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 EMCNQ9ULC0 261 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 TRAF6Q9Y4K3 522 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 HMX2A2RU54 273 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 CCDC85CA6NKD9 419 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 NCK1P16333 377 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 BMXP51813 675 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 SSTP61278 116 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 SEMG2Q02383 582 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 PMS2P3Q13401 168 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 FRG1Q14331 258 aaKnown RBP10.4□□□□□ -0.74
VPS18-201ENST00000220509 FBXO43Q4G163 708 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 ARHGAP15Q53QZ3 475 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 PAGE2BQ5JRK9 111 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 RSBN1Q5VWQ0 802 aaPredicted RBP10.4□□□□□ -0.74
VPS18-201ENST00000220509 FKBP9P1Q75LS8 142 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 DET1Q7L5Y6 550 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 TBC1D19Q8N5T2 526 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 PNPLA1Q8N8W4 532 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 OR13C4Q8NGS5 318 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 MTFMTQ96DP5 389 aaKnown RBP10.4□□□□□ -0.74
VPS18-201ENST00000220509 RNF145Q96MT1 663 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 PSD2Q9BQI7 771 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 TDRD1Q9BXT4 1180 aaKnown RBP10.4□□□□□ -0.74
VPS18-201ENST00000220509 TMLHEQ9NVH6 421 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 PNMA8BQ9ULN7 279 aaPredicted RBP10.4□□□□□ -0.74
VPS18-201ENST00000220509 OAZ3Q9UMX2 235 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 COPG1Q9Y678 874 aaKnown RBP10.4□□□□□ -0.74
VPS18-201ENST00000220509 C12orf71A8MTZ7 269 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 H3BNH8 94 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 SOCS2O14508 198 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 EI24O14681 340 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 IPO13O94829 963 aaKnown RBP10.4□□□□□ -0.74
VPS18-201ENST00000220509 SNAP29O95721 258 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 KCNJ5P48544 419 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 MAPKAPK2P49137 400 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 YBEYP58557 167 aaPredicted RBP10.4□□□□□ -0.74
VPS18-201ENST00000220509 RELQ04864 619 aaPredicted RBP10.4□□□□□ -0.74
VPS18-201ENST00000220509 PTPRCAPQ14761 206 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 ZNF425Q6IV72 752 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 CHSY3Q70JA7 882 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 MAMDC2Q7Z304 686 aaPredicted RBP10.4□□□□□ -0.74
VPS18-201ENST00000220509 FBXO22Q8NEZ5 403 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 OR56A4Q8NGH8 313 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 PSMA8Q8TAA3 256 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 FAM162AQ96A26 154 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 DACH2Q96NX9 599 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 FCRL3Q96P31 734 aaPredicted RBP10.4□□□□□ -0.74
VPS18-201ENST00000220509 OSBPL2Q9H1P3 480 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 STN1Q9H668 368 aaKnown RBP10.4□□□□□ -0.74
VPS18-201ENST00000220509 NMUR1Q9HB89 426 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 MAT2BQ9NZL9 334 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 EIF2B4Q9UI10 523 aaKnown RBP10.4□□□□□ -0.74
VPS18-201ENST00000220509 SLC25A13Q9UJS0 675 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 CNOT6Q9ULM6 557 aaKnown RBP10.4□□□□□ -0.74
VPS18-201ENST00000220509 SNX6Q9UNH7 406 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 ARL5AQ9Y689 179 aa10.4□□□□□ -0.74
VPS18-201ENST00000220509 A0A1W2PQ45 241 aaPredicted RBP10.39□□□□□ -0.75
VPS18-201ENST00000220509 A0A1W2PQY0 241 aa10.39□□□□□ -0.75
VPS18-201ENST00000220509 MYO1GB0I1T2 1018 aa10.39□□□□□ -0.75
VPS18-201ENST00000220509 NDST3O95803 873 aa10.39□□□□□ -0.75
VPS18-201ENST00000220509 TM4SF4P48230 202 aa10.39□□□□□ -0.75
VPS18-201ENST00000220509 ACY1Q03154 408 aa10.39□□□□□ -0.75
VPS18-201ENST00000220509 TRIP4Q15650 581 aaPredicted RBP10.39□□□□□ -0.75
VPS18-201ENST00000220509 PARP15Q460N3 678 aa10.39□□□□□ -0.75
VPS18-201ENST00000220509 C16orf54Q6UWD8 224 aa10.39□□□□□ -0.75
VPS18-201ENST00000220509 FAM126BQ8IXS8 530 aa10.39□□□□□ -0.75
VPS18-201ENST00000220509 RDH11Q8TC12 318 aa10.39□□□□□ -0.75
VPS18-201ENST00000220509 LINGO1Q96FE5 620 aa10.39□□□□□ -0.75
VPS18-201ENST00000220509 ASPSCR1Q9BZE9 553 aa10.39□□□□□ -0.75
VPS18-201ENST00000220509 MKRN2Q9H000 416 aaKnown RBP10.39□□□□□ -0.75
VPS18-201ENST00000220509 ELOVL6Q9H5J4 265 aa10.39□□□□□ -0.75
VPS18-201ENST00000220509 NARFLQ9H6Q4 476 aa10.39□□□□□ -0.75
VPS18-201ENST00000220509 ZDHHC6Q9H6R6 413 aa10.39□□□□□ -0.75
VPS18-201ENST00000220509 ITM2CQ9NQX7 267 aa10.39□□□□□ -0.75
VPS18-201ENST00000220509 TMEM161AQ9NX61 479 aa10.39□□□□□ -0.75
VPS18-201ENST00000220509 EIF3LQ9Y262 564 aaKnown RBP10.39□□□□□ -0.75
VPS18-201ENST00000220509 RAI2Q9Y5P3 530 aa10.39□□□□□ -0.75
VPS18-201ENST00000220509 TTC3P53804 2025 aa10.39□□□□□ -0.75
VPS18-201ENST00000220509 OR7A10O76100 309 aa10.39□□□□□ -0.75
VPS18-201ENST00000220509 IGSF6O95976 241 aa10.39□□□□□ -0.75
VPS18-201ENST00000220509 GOT2P00505 430 aaKnown RBP10.39□□□□□ -0.75
VPS18-201ENST00000220509 SNRPB2P08579 225 aaKnown RBP10.39□□□□□ -0.75
VPS18-201ENST00000220509 LBPP18428 481 aa10.39□□□□□ -0.75
VPS18-201ENST00000220509 GDI2P50395 445 aaKnown RBP10.39□□□□□ -0.75
VPS18-201ENST00000220509 AASDHQ4L235 1098 aaPredicted RBP10.39□□□□□ -0.75
VPS18-201ENST00000220509 EPGNQ6UW88 154 aa10.39□□□□□ -0.75
VPS18-201ENST00000220509 PIWIL3Q7Z3Z3 882 aaKnown RBP10.39□□□□□ -0.75
VPS18-201ENST00000220509 CAMK1DQ8IU85 385 aa10.39□□□□□ -0.75
VPS18-201ENST00000220509 CCDC103Q8IW40 242 aa10.39□□□□□ -0.75
VPS18-201ENST00000220509 LINC01465Q8N7H1 131 aa10.39□□□□□ -0.75
VPS18-201ENST00000220509 LEMD2Q8NC56 503 aa10.39□□□□□ -0.75
VPS18-201ENST00000220509 AUTS2Q8WXX7 1259 aa10.39□□□□□ -0.75
VPS18-201ENST00000220509 FUBP3Q96I24 572 aaKnown RBP eCLIP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms