RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 ESR1P03372 595 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 PCNAP12004 261 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 HLA-EP13747 358 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 ACADSP16219 412 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 GPX3P22352 226 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 SUOXP51687 545 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 CCNG1P51959 295 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 ATP6V0D1P61421 351 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 AP1S1P61966 158 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 ANKDD1AQ495B1 522 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 ARSIQ5FYB1 569 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 C22orf39Q6P5X5 142 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 SPPL2CQ8IUH8 684 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 PQLC1Q8N2U9 271 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 LILRB1Q8NHL6 650 aaPredicted RBP9.78□□□□□ -0.84
USP11-201ENST00000218348 ZNF707Q96C28 371 aaPredicted RBP9.78□□□□□ -0.84
USP11-201ENST00000218348 CNBD2Q96M20 576 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 TUBGCP5Q96RT8 1024 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 WRAP53Q9BUR4 548 aaKnown RBP9.78□□□□□ -0.84
USP11-201ENST00000218348 ATG10Q9H0Y0 220 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 SUV39H2Q9H5I1 410 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 ARMC7Q9H6L4 198 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 BRD9Q9H8M2 597 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 MAGEE1Q9HCI5 957 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 MSRAQ9UJ68 235 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 DTNAQ9Y4J8 743 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 SDK1Q7Z5N4 2213 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 E2F3O00716 465 aa9.77□□□□□ -0.84
USP11-201ENST00000218348 CHEK2O96017 543 aa9.77□□□□□ -0.84
USP11-201ENST00000218348 HMOX2P30519 316 aa9.77□□□□□ -0.84
USP11-201ENST00000218348 RECQLP46063 649 aaPredicted RBP9.77□□□□□ -0.84
USP11-201ENST00000218348 EPHA5P54756 1037 aa9.77□□□□□ -0.84
USP11-201ENST00000218348 NAA20P61599 178 aa9.77□□□□□ -0.84
USP11-201ENST00000218348 SNRPD1P62314 119 aaKnown RBP9.77□□□□□ -0.84
USP11-201ENST00000218348 HYAL1Q12794 435 aa9.77□□□□□ -0.84
USP11-201ENST00000218348 NFYCQ13952 458 aa9.77□□□□□ -0.84
USP11-201ENST00000218348 AARS2Q5JTZ9 985 aaKnown RBP9.77□□□□□ -0.84
USP11-201ENST00000218348 TMEM215Q68D42 235 aa9.77□□□□□ -0.84
USP11-201ENST00000218348 GOLGA7Q7Z5G4 137 aa9.77□□□□□ -0.84
USP11-201ENST00000218348 TMEM151BQ8IW70 566 aa9.77□□□□□ -0.84
USP11-201ENST00000218348 SFTPA1Q8IWL2 248 aa9.77□□□□□ -0.84
USP11-201ENST00000218348 OR56A4Q8NGH8 313 aa9.77□□□□□ -0.84
USP11-201ENST00000218348 RHEBL1Q8TAI7 183 aa9.77□□□□□ -0.84
USP11-201ENST00000218348 PIP4K2CQ8TBX8 421 aa9.77□□□□□ -0.84
USP11-201ENST00000218348 KCNJ9Q92806 393 aa9.77□□□□□ -0.84
USP11-201ENST00000218348 PPM1MQ96MI6 270 aa9.77□□□□□ -0.84
USP11-201ENST00000218348 TRMOQ9BU70 441 aa9.77□□□□□ -0.84
USP11-201ENST00000218348 SLC25A23Q9BV35 468 aa9.77□□□□□ -0.84
USP11-201ENST00000218348 TDP1Q9NUW8 608 aa9.77□□□□□ -0.84
USP11-201ENST00000218348 MAP10Q9P2G4 905 aa9.77□□□□□ -0.84
USP11-201ENST00000218348 APPL1Q9UKG1 709 aa9.77□□□□□ -0.84
USP11-201ENST00000218348 TRIOBPQ9H2D6 2365 aa9.77□□□□□ -0.84
USP11-201ENST00000218348 CROCCQ5TZA2 2017 aa9.77□□□□□ -0.84
USP11-201ENST00000218348 ZBTB11O95625 1053 aaPredicted RBP9.77□□□□□ -0.85
USP11-201ENST00000218348 SLC2A4P14672 509 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 ITPKAP23677 461 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 LTBRP36941 435 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 ETV3P41162 512 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 TUBA1BP68363 451 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 CREMQ03060 361 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 ABRAXAS2Q15018 415 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 PAGE3Q5JUK9 113 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 C6orf10Q5SRN2 563 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 C6orf52Q5T4I8 152 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 CHSY3Q70JA7 882 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 HTR3DQ70Z44 454 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 TUBA1AQ71U36 451 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 VRK3Q8IV63 474 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 SUN5Q8TC36 379 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 ACDQ96AP0 544 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 SPOCK3Q9BQ16 436 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 CLEC1BQ9P126 229 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 COQ6Q9Y2Z9 468 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 NDUFAF1Q9Y375 327 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 DHRS7Q9Y394 339 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 RNF11Q9Y3C5 154 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 POLR3HQ9Y535 204 aaPredicted RBP9.77□□□□□ -0.85
USP11-201ENST00000218348 MYO15AQ9UKN7 3530 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 KPNA3O00505 521 aaPredicted RBP9.77□□□□□ -0.85
USP11-201ENST00000218348 ADAM23O75077 832 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 MOSPD3O75425 235 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 PABPC1P11940 636 aaKnown RBP9.77□□□□□ -0.85
USP11-201ENST00000218348 CKMT2P17540 419 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 XPAP23025 273 aaPredicted RBP9.77□□□□□ -0.85
USP11-201ENST00000218348 S100A1P23297 94 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 SPAM1P38567 509 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 SLC26A3P40879 764 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 RPL38P63173 70 aaKnown RBP9.77□□□□□ -0.85
USP11-201ENST00000218348 PTSQ03393 145 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 DDX39BQ13838 428 aaKnown RBP9.77□□□□□ -0.85
USP11-201ENST00000218348 GTF2H2Q13888 395 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 PTGR1Q14914 329 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 MTX3Q5HYI7 312 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 KANK2Q63ZY3 851 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 GTF2H2CQ6P1K8 395 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 IYDQ6PHW0 289 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 SBSNQ6UWP8 590 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 CCDC149Q6ZUS6 474 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 SNX20Q7Z614 316 aa9.77□□□□□ -0.85
USP11-201ENST00000218348 RBFAQ8N0V3 343 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms