RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 CHMP1BQ7LBR1 199 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 C1QTNF6Q9BXI9 259 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 LRRC3Q9BY71 257 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 TM9SF3Q9HD45 589 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 ABCD2Q9UBJ2 740 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 TBC1D24Q9ULP9 559 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 STAP1Q9ULZ2 295 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 ZNFX1Q9P2E3 1918 aaKnown RBP14.4□□□□□ -0.1
PTPRA-201ENST00000216877 TEX46H3BTG2 121 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 SH3BP2P78314 561 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 CYP4F8P98187 520 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 IRF3Q14653 427 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 METTL2BQ6P1Q9 378 aaKnown RBP14.4□□□□□ -0.1
PTPRA-201ENST00000216877 SPATA22Q8NHS9 363 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 GPR151Q8TDV0 419 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 CCDC126Q96EE4 140 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 GMCL1Q96IK5 515 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 DPCDQ9BVM2 203 aaPredicted RBP14.4□□□□□ -0.1
PTPRA-201ENST00000216877 FANCFQ9NPI8 374 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 NPAP1Q9NZP6 1156 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 FAM92AA1XBS5 289 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 SHOXO15266 292 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 CNPP09543 421 aaKnown RBP14.4□□□□□ -0.1
PTPRA-201ENST00000216877 KELP23276 732 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 EPHA2P29317 976 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 TIE1P35590 1138 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 DCTP40126 519 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 HOXC5Q00444 222 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 RGMBQ6NW40 437 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 TMEM179BQ7Z7N9 219 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 CYP4Z2PQ8N1L4 340 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 LPIN3Q9BQK8 851 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 SPATA9Q9BWV2 254 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 BTBD2Q9BX70 525 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 ZNF556Q9HAH1 456 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 SLAMF7Q9NQ25 335 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 RIMKLBQ9ULI2 386 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 PAPPA2Q9BXP8 1791 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 FAM240BA0A1B0GVZ2 78 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 ARVCFO00192 962 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 DSCR3O14972 297 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 TULP3O75386 442 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 VIPP01282 170 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 LTA4HP09960 611 aaKnown RBP14.4□□□□□ -0.1
PTPRA-201ENST00000216877 PRKCDQ05655 676 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 HHIPL2Q6UWX4 724 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 TMEM135Q86UB9 458 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 C19orf18Q8NEA5 215 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 BPIFB1Q8TDL5 484 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 DIRAS2Q96HU8 199 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 OR2A14Q96R47 310 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 NTPCRQ9BSD7 190 aaKnown RBP14.4□□□□□ -0.1
PTPRA-201ENST00000216877 TRAF4Q9BUZ4 470 aaPredicted RBP14.4□□□□□ -0.1
PTPRA-201ENST00000216877 SORBS1Q9BX66 1292 aaKnown RBP14.4□□□□□ -0.1
PTPRA-201ENST00000216877 MCUBQ9NWR8 336 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 FNDC3AQ9Y2H6 1198 aaKnown RBP14.4□□□□□ -0.1
PTPRA-201ENST00000216877 SCN9AQ15858 1988 aa14.4□□□□□ -0.1
PTPRA-201ENST00000216877 SUPT3HB4E1H0 165 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 PLATP00750 562 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 NR3C2P08235 984 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 CXCL8P10145 99 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 CDH5P33151 784 aaPredicted RBP14.39□□□□□ -0.11
PTPRA-201ENST00000216877 MAGEA12P43365 314 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 HCAR3P49019 387 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 SMSP52788 366 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 RBBP7Q16576 425 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 AFG1LQ8WV93 481 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 ARFGEF1Q9Y6D6 1849 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 UPK1AO00322 258 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 BMP1P13497 986 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 SLC1A2P43004 574 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 TGM4P49221 684 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 GLUD2P49448 558 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 SLC35A2P78381 396 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 PPP1R26Q5T8A7 1209 aaPredicted RBP14.39□□□□□ -0.11
PTPRA-201ENST00000216877 ERICH5Q6P6B1 374 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 BLOC1S3Q6QNY0 202 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 MARC2Q969Z3 335 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 PDP1Q9P0J1 537 aaPredicted RBP14.39□□□□□ -0.11
PTPRA-201ENST00000216877 EEF2KO00418 725 aaKnown RBP14.39□□□□□ -0.11
PTPRA-201ENST00000216877 KATNA1O75449 491 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 SFNP31947 248 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 SULT1E1P49888 294 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 ATN1P54259 1190 aaPredicted RBP14.39□□□□□ -0.11
PTPRA-201ENST00000216877 EEFSECP57772 596 aaKnown RBP14.39□□□□□ -0.11
PTPRA-201ENST00000216877 NKX3-2P78367 333 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 RPA4Q13156 261 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 TATDN3Q17R31 274 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 Q6ZPB1 254 aaPredicted RBP14.39□□□□□ -0.11
PTPRA-201ENST00000216877 RACGAP1Q9H0H5 632 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 ANKHQ9HCJ1 492 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 POLG2Q9UHN1 485 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 SPATA2Q9UM82 520 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 RIPK3Q9Y572 518 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 PDE4DIPQ5VU43 2346 aa14.39□□□□□ -0.11
PTPRA-201ENST00000216877 CITO14578 2027 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 H3BM21 787 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 SCAMP3O14828 347 aaKnown RBP14.38□□□□□ -0.11
PTPRA-201ENST00000216877 AP2A1O95782 977 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 CD6P30203 668 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms