RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 NTN4Q9HB63 628 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 SAP18O00422 153 aaKnown RBP14.79□□□□□ -0.04
EFNB1-201ENST00000204961 STC2O76061 302 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 OAZ2O95190 189 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 FADS2O95864 444 aaKnown RBP14.79□□□□□ -0.04
EFNB1-201ENST00000204961 FGF4P08620 206 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 PIM1P11309 404 aaPredicted RBP14.79□□□□□ -0.04
EFNB1-201ENST00000204961 POU2F1P14859 743 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 TYMPP19971 482 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 CDKN2CP42773 168 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 TAF1AQ15573 450 aaPredicted RBP14.79□□□□□ -0.04
EFNB1-201ENST00000204961 SLC44A2Q8IWA5 706 aaPredicted RBP14.79□□□□□ -0.04
EFNB1-201ENST00000204961 SLC13A3Q8WWT9 602 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 PLGRKTQ9HBL7 147 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 TBC1D23Q9NUY8 699 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 GPRC5BQ9NZH0 403 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.79□□□□□ -0.04
EFNB1-201ENST00000204961 BBIP1A8MTZ0 92 aa14.78□□□□□ -0.04
EFNB1-201ENST00000204961 HSD17B1P14061 328 aa14.78□□□□□ -0.04
EFNB1-201ENST00000204961 CTSOP43234 321 aaPredicted RBP14.78□□□□□ -0.04
EFNB1-201ENST00000204961 DNASE1L3Q13609 305 aa14.78□□□□□ -0.04
EFNB1-201ENST00000204961 CYP2A13Q16696 494 aa14.78□□□□□ -0.04
EFNB1-201ENST00000204961 AASDHQ4L235 1098 aaPredicted RBP14.78□□□□□ -0.04
EFNB1-201ENST00000204961 CES5AQ6NT32 575 aa14.78□□□□□ -0.04
EFNB1-201ENST00000204961 TBC1D21Q8IYX1 336 aa14.78□□□□□ -0.04
EFNB1-201ENST00000204961 MED8Q96G25 268 aa14.78□□□□□ -0.04
EFNB1-201ENST00000204961 ZDHHC4Q9NPG8 344 aa14.78□□□□□ -0.04
EFNB1-201ENST00000204961 INIPQ9NRY2 104 aa14.78□□□□□ -0.04
EFNB1-201ENST00000204961 PCDHGA11Q9Y5H2 935 aa14.78□□□□□ -0.04
EFNB1-201ENST00000204961 ARID1BQ8NFD5 2236 aaPredicted RBP14.78□□□□□ -0.04
EFNB1-201ENST00000204961 LOC285556D6RIA3 1793 aa14.78□□□□□ -0.04
EFNB1-201ENST00000204961 TTC36A6NLP5 189 aa14.78□□□□□ -0.04
EFNB1-201ENST00000204961 K7EPI3 171 aa14.78□□□□□ -0.04
EFNB1-201ENST00000204961 COQ9O75208 318 aa14.78□□□□□ -0.04
EFNB1-201ENST00000204961 MYF6P23409 242 aa14.78□□□□□ -0.04
EFNB1-201ENST00000204961 ZFP36L2P47974 494 aaKnown RBP14.78□□□□□ -0.04
EFNB1-201ENST00000204961 ALDH7A1P49419 539 aaKnown RBP14.78□□□□□ -0.04
EFNB1-201ENST00000204961 YBEYP58557 167 aaPredicted RBP14.78□□□□□ -0.04
EFNB1-201ENST00000204961 ABRQ12979 859 aa14.78□□□□□ -0.04
EFNB1-201ENST00000204961 CRY1Q16526 586 aa14.78□□□□□ -0.04
EFNB1-201ENST00000204961 SYT16Q17RD7 645 aa14.78□□□□□ -0.04
EFNB1-201ENST00000204961 DOK6Q6PKX4 331 aa14.78□□□□□ -0.04
EFNB1-201ENST00000204961 TEX26Q8N6G2 289 aa14.78□□□□□ -0.04
EFNB1-201ENST00000204961 SCAMP4Q969E2 229 aa14.78□□□□□ -0.04
EFNB1-201ENST00000204961 ZNF583Q96ND8 569 aa14.78□□□□□ -0.04
EFNB1-201ENST00000204961 ZFYVE1Q9HBF4 777 aa14.78□□□□□ -0.04
EFNB1-201ENST00000204961 COMMD8Q9NX08 183 aa14.78□□□□□ -0.04
EFNB1-201ENST00000204961 SARDHQ9UL12 918 aa14.78□□□□□ -0.04
EFNB1-201ENST00000204961 CCDC88CQ9P219 2028 aa14.78□□□□□ -0.04
EFNB1-201ENST00000204961 A8MU76 341 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 AOC2O75106 756 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 ADAMTS4O75173 837 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 VBP1P61758 197 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 SLC14A1Q13336 389 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 EGFLAMQ63HQ2 1017 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 SERPINA13PQ6UXR4 307 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 DLEU7Q6UYE1 221 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 LRRC49Q8IUZ0 686 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 C8orf59Q8N0T1 100 aaPredicted RBP14.77□□□□□ -0.04
EFNB1-201ENST00000204961 ZNF555Q8NEP9 628 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 MAL2Q969L2 176 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 C8orf48Q96LL4 319 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 TRPM5Q9NZQ8 1165 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 VPS51Q9UID3 782 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 MYO16Q9Y6X6 1858 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 FAM234BA2RU67 622 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 CXCR6O00574 342 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 TBC1D4O60343 1298 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 PGRP06401 933 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 CCNA2P20248 432 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 NUP107P57740 925 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 CD47Q08722 323 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 PAGE2BQ5JRK9 111 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 PRMT9Q6P2P2 845 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 TRIB3Q96RU7 358 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 TTPALQ9BTX7 342 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 TRIM54Q9BYV2 358 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 ABCD2Q9UBJ2 740 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 EIF3LQ9Y262 564 aaKnown RBP14.77□□□□□ -0.04
EFNB1-201ENST00000204961 SLC22A14Q9Y267 594 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 SNX5Q9Y5X3 404 aa14.77□□□□□ -0.04
EFNB1-201ENST00000204961 TCRBV5S2A0A599 114 aa14.77□□□□□ -0.05
EFNB1-201ENST00000204961 TMEM247A6NEH6 219 aa14.77□□□□□ -0.05
EFNB1-201ENST00000204961 OGNP20774 298 aaKnown RBP14.77□□□□□ -0.05
EFNB1-201ENST00000204961 NUDT6P53370 316 aa14.77□□□□□ -0.05
EFNB1-201ENST00000204961 SFSWAPQ12872 951 aaKnown RBP14.77□□□□□ -0.05
EFNB1-201ENST00000204961 DAG1Q14118 895 aa14.77□□□□□ -0.05
EFNB1-201ENST00000204961 SPCS2Q15005 226 aa14.77□□□□□ -0.05
EFNB1-201ENST00000204961 SLC14A2Q15849 920 aa14.77□□□□□ -0.05
EFNB1-201ENST00000204961 CTU2Q2VPK5 515 aaKnown RBP14.77□□□□□ -0.05
EFNB1-201ENST00000204961 CRTC3Q6UUV7 619 aa14.77□□□□□ -0.05
EFNB1-201ENST00000204961 DDHD1Q8NEL9 900 aa14.77□□□□□ -0.05
EFNB1-201ENST00000204961 TNIP2Q8NFZ5 429 aa14.77□□□□□ -0.05
EFNB1-201ENST00000204961 RHEBL1Q8TAI7 183 aa14.77□□□□□ -0.05
EFNB1-201ENST00000204961 OSCP1Q8WVF1 389 aa14.77□□□□□ -0.05
EFNB1-201ENST00000204961 RPL3LQ92901 407 aaKnown RBP14.77□□□□□ -0.05
EFNB1-201ENST00000204961 ZUFSPQ96AP4 578 aa14.77□□□□□ -0.05
EFNB1-201ENST00000204961 AMBRA1Q9C0C7 1298 aa14.77□□□□□ -0.05
EFNB1-201ENST00000204961 ELOVL6Q9H5J4 265 aa14.77□□□□□ -0.05
EFNB1-201ENST00000204961 SLC25A37Q9NYZ2 338 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms