RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 C7orf61Q8IZ16 206 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 OR8H1Q8NGG4 311 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 NAT14Q8WUY8 206 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 FUBP3Q96I24 572 aaKnown RBP eCLIP5.99□□□□□ -1.45
VPS13D-201ENST00000011700 PRRG4Q9BZD6 226 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 MAGEH1Q9H213 219 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 FAM83DQ9H4H8 585 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 ALG9Q9H6U8 611 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 OAS3Q9Y6K5 1087 aaKnown RBP5.99□□□□□ -1.45
VPS13D-201ENST00000011700 A0A1B0GVI7 797 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 PLD2O14939 933 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 BCAS2O75934 225 aaPredicted RBP5.99□□□□□ -1.45
VPS13D-201ENST00000011700 DNASE1L1P49184 302 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 TEX44Q53QW1 395 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 MAPK15Q8TD08 544 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 BIRC8Q96P09 236 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 EFCAB11Q9BUY7 163 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 TMEM260Q9NX78 707 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 CLIC5Q9NZA1 410 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 DNAJB9Q9UBS3 223 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 GSC2O15499 205 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 NME6O75414 186 aaPredicted RBP5.99□□□□□ -1.45
VPS13D-201ENST00000011700 RPP40O75818 363 aaKnown RBP5.99□□□□□ -1.45
VPS13D-201ENST00000011700 RARAP10276 462 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 ZNF37AP17032 561 aaPredicted RBP5.99□□□□□ -1.45
VPS13D-201ENST00000011700 DLSTP36957 453 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 GDPGP1Q6ZNW5 385 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 SLC34A3Q8N130 599 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 CYP2W1Q8TAV3 490 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 KLHL6Q8WZ60 621 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 TAPBPLQ9BX59 468 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 BTBD1Q9H0C5 482 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 ELAC1Q9H777 363 aaKnown RBP5.99□□□□□ -1.45
VPS13D-201ENST00000011700 FOLH1BQ9HBA9 442 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 SNX15Q9NRS6 342 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 SOHLH2Q9NX45 425 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 C19orf25Q9UFG5 118 aaPredicted RBP5.99□□□□□ -1.45
VPS13D-201ENST00000011700 VEGFDO43915 354 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 EDF1O60869 148 aaKnown RBP5.99□□□□□ -1.45
VPS13D-201ENST00000011700 CD63P08962 238 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 ZNF823P16415 610 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 ACTR1BP42025 376 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 HERVK_113P62684 666 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 KIAA0319Q5VV43 1072 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 DUPD1Q68J44 220 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 CWF19L1Q69YN2 538 aaKnown RBP5.99□□□□□ -1.45
VPS13D-201ENST00000011700 RNF44Q7L0R7 432 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 OR2L3Q8NG85 312 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 OR52K2Q8NGK3 314 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 ADAMTS18Q8TE60 1221 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 SHDQ96IW2 340 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 TRIB3Q96RU7 358 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 SLC30A2Q9BRI3 323 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 ZSCAN5AQ9BUG6 496 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 IDI2Q9BXS1 227 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 CACFD1Q9UGQ2 172 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 ASB4Q9Y574 426 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 SNX10Q9Y5X0 201 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 SLIT2O94813 1529 aa5.99□□□□□ -1.45
VPS13D-201ENST00000011700 C2orf71A6NGG8 1288 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 LRRC72A6NJI9 287 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 IL12BP29460 328 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 RARRES1P49788 294 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 MERTKQ12866 999 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 BCL2A1Q16548 175 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 C15orf59Q2T9L4 293 aaPredicted RBP5.98□□□□□ -1.45
VPS13D-201ENST00000011700 FNDC3BQ53EP0 1204 aaKnown RBP5.98□□□□□ -1.45
VPS13D-201ENST00000011700 C12orf40Q86WS4 652 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 OR8H3Q8N146 312 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 OR2W6PQ8NHA6 318 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 SUN3Q8TAQ9 357 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 CHPT1Q8WUD6 406 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 CDC6Q99741 560 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 COPS4Q9BT78 406 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 COL20A1Q9P218 1284 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 NFATC1O95644 943 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 GLDCP23378 1020 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 RFX3P48380 749 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 ZNF157P51786 506 aaPredicted RBP5.98□□□□□ -1.45
VPS13D-201ENST00000011700 GABARAPL2P60520 117 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 ERVK-8P63133 956 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 GRB10Q13322 594 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 HMGN3Q15651 99 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 LRRC70Q7Z2Q7 622 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 CCDC28AQ8IWP9 274 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 TOR1AIP2Q8NFQ8 470 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 ELP5Q8TE02 316 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 TRIB2Q92519 343 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 SHC3Q92529 594 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 SLC35C1Q96A29 364 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 MTMR9Q96QG7 549 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 SLC25A51Q9H1U9 297 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 NINJ2Q9NZG7 142 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 PCDHB11Q9Y5F2 797 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 ATP6AP2A0A1C7CYW4 349 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 LCN1P31025 176 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 TSPAN5P62079 268 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 HERVK_113P63132 956 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 PSPHP78330 225 aa5.98□□□□□ -1.45
VPS13D-201ENST00000011700 ST3GAL4Q11206 333 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms