RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 NCS1P62166 190 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 PHC1P78364 1004 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 ZNF846Q147U1 533 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 INAQ16352 499 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 INAVAQ3KP66 663 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 C9orf131Q5VYM1 1079 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 SUSD1Q6UWL2 747 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 MBOAT1Q6ZNC8 495 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 CYP4Z1Q86W10 505 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 CLDN19Q8N6F1 224 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 HPS1Q92902 700 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 PEX13Q92968 403 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 SEPT5Q99719 369 aaPredicted RBP13.77□□□□□ -0.21
USH1C-201ENST00000005226 RBM4BQ9BQ04 359 aaKnown RBP13.77□□□□□ -0.21
USH1C-201ENST00000005226 RBM4Q9BWF3 364 aaKnown RBP13.77□□□□□ -0.21
USH1C-201ENST00000005226 BOCQ9BWV1 1114 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 ATP13A3Q9H7F0 1226 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 SCUBE2Q9NQ36 999 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 CCL27Q9Y4X3 112 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 RAI2Q9Y5P3 530 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 M0R3G1 203 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 AREL1O15033 823 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 TAPBPO15533 448 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 SEC22BO75396 215 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 CREG1O75629 220 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 BMP4P12644 408 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 EPHA2P29317 976 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 OXCT1P55809 520 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 RAB15P59190 212 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 TRAF3Q13114 568 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 GTF2H3Q13889 308 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 ZNF691Q5VV52 312 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 C16orf59Q7L2K0 433 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 SAPCD2Q86UD0 394 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 PJA1Q8NG27 643 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 OR7A2PQ8NGA2 310 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 LKAAEAR1Q8TD35 194 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 MGME1Q9BQP7 344 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 INPP5KQ9BT40 448 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 DPY30Q9C005 99 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 FBXO44Q9H4M3 255 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 AKIP1Q9NQ31 210 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 UBA2Q9UBT2 640 aaPredicted RBP13.76□□□□□ -0.21
USH1C-201ENST00000005226 GREB1Q4ZG55 1949 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 A8MU76 341 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 BCKDKO14874 412 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 HPRP00739 348 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 CLCN7P51798 805 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 YBEYP58557 167 aaPredicted RBP13.76□□□□□ -0.21
USH1C-201ENST00000005226 NPTX1Q15818 432 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 CARD16Q5EG05 197 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 CES5AQ6NT32 575 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 SBSNQ6UWP8 590 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 CEP68Q76N32 757 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 ZNF598Q86UK7 904 aaKnown RBP13.76□□□□□ -0.21
USH1C-201ENST00000005226 ANKRD13BQ86YJ7 626 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 ARL10Q8N8L6 244 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 OR8J3Q8NGG0 315 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 OR52E6Q96RD3 313 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 PARK7Q99497 189 aaKnown RBP13.76□□□□□ -0.21
USH1C-201ENST00000005226 MROQ9BYG7 248 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 EPS8L2Q9H6S3 715 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 VPS4AQ9UN37 437 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 PCDHB8Q9UN66 801 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 B3GNT3Q9Y2A9 372 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 PCDHB14Q9Y5E9 798 aa13.76□□□□□ -0.21
USH1C-201ENST00000005226 UPK3BL1B0FP48 263 aa13.75□□□□□ -0.21
USH1C-201ENST00000005226 UPK3BL2E5RIL1 263 aa13.75□□□□□ -0.21
USH1C-201ENST00000005226 FFAR2O15552 330 aa13.75□□□□□ -0.21
USH1C-201ENST00000005226 ZNF623O75123 536 aa13.75□□□□□ -0.21
USH1C-201ENST00000005226 ANGPTL1O95841 491 aa13.75□□□□□ -0.21
USH1C-201ENST00000005226 PGRP06401 933 aa13.75□□□□□ -0.21
USH1C-201ENST00000005226 PSMB9P28065 219 aa13.75□□□□□ -0.21
USH1C-201ENST00000005226 AKT1P31749 480 aa13.75□□□□□ -0.21
USH1C-201ENST00000005226 MGAT3Q09327 533 aa13.75□□□□□ -0.21
USH1C-201ENST00000005226 BTG3Q14201 252 aaPredicted RBP13.75□□□□□ -0.21
USH1C-201ENST00000005226 PHKG1Q16816 387 aa13.75□□□□□ -0.21
USH1C-201ENST00000005226 TRPV1Q8NER1 839 aa13.75□□□□□ -0.21
USH1C-201ENST00000005226 SLC35B4Q969S0 331 aa13.75□□□□□ -0.21
USH1C-201ENST00000005226 EID2BQ96D98 161 aa13.75□□□□□ -0.21
USH1C-201ENST00000005226 ZBTB18Q99592 522 aa13.75□□□□□ -0.21
USH1C-201ENST00000005226 EGFL8Q99944 293 aa13.75□□□□□ -0.21
USH1C-201ENST00000005226 TDRD15B5MCY1 1934 aaKnown RBP13.75□□□□□ -0.21
USH1C-201ENST00000005226 MYO1GB0I1T2 1018 aa13.75□□□□□ -0.21
USH1C-201ENST00000005226 F5H5T6 163 aa13.75□□□□□ -0.21
USH1C-201ENST00000005226 AQP9O43315 295 aa13.75□□□□□ -0.21
USH1C-201ENST00000005226 ZNF682O95780 498 aa13.75□□□□□ -0.21
USH1C-201ENST00000005226 FADS2O95864 444 aaKnown RBP13.75□□□□□ -0.21
USH1C-201ENST00000005226 TYMPP19971 482 aa13.75□□□□□ -0.21
USH1C-201ENST00000005226 CATSPEREQ5SY80 951 aa13.75□□□□□ -0.21
USH1C-201ENST00000005226 B3GNT8Q7Z7M8 397 aa13.75□□□□□ -0.21
USH1C-201ENST00000005226 MICU2Q8IYU8 434 aa13.75□□□□□ -0.21
USH1C-201ENST00000005226 EID3Q8N140 333 aa13.75□□□□□ -0.21
USH1C-201ENST00000005226 CIPCQ9C0C6 399 aa13.75□□□□□ -0.21
USH1C-201ENST00000005226 HMG20AQ9NP66 347 aa13.75□□□□□ -0.21
USH1C-201ENST00000005226 RASSF1Q9NS23 344 aa13.75□□□□□ -0.21
USH1C-201ENST00000005226 AGO1Q9UL18 857 aaKnown RBP13.75□□□□□ -0.21
USH1C-201ENST00000005226 ANKRD36A6QL64 1941 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 A8MX80 341 aa13.74□□□□□ -0.21
USH1C-201ENST00000005226 ANKRD66B4E2M5 251 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms