RNA–Protein interactions for RNA: ENSMUST00000110505.7

Hmgb1-203, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,720 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-203ENSMUST00000110505 Rnf6Q9DBU5 667 aa4.23□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Ddx24Q9ESV0 857 aaKnown RBP4.23□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Ca5bQ9QZA0 317 aa4.23□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Myo1cQ9WTI7 1063 aa4.23□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 S1pr3Q9Z0U9 378 aa4.23□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Rpl9-ps1S4R1R7 191 aa4.23□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 AgrnA2ASQ1 1950 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Gm3604A0A087WPN2 559 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Rsg1A2A825 258 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Ttc39aA2ACP1 578 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Mocs3A2BDX3 460 aaKnown RBP4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Tcte1A6H639 498 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Slfn9B1ARD6 910 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Unc13dB2RUP2 1085 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Zfp169E9Q3R6 731 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Abhd12bG3UZN6 359 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Gm4847G3X946 537 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Vmn1r168K7N6B6 309 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Zmat3O54836 290 aaKnown RBP4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 PrkcaP20444 672 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Acvr2aP27038 513 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Rab20P35295 233 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Ptx3P48759 381 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 ClgnP52194 611 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Mrps21P58059 87 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Rad54lP70270 747 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Mmp7Q10738 264 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Q3TTJ4 293 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Hdgfl2Q3UMU9 669 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Q3UY34 256 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Apobec4Q497M3 374 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Dzip1lQ499E4 774 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Taar8aQ5QD07 344 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Acvrl1Q61288 502 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 SrmsQ62270 496 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Itga3Q62470 1053 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Sf1Q64213 653 aaKnown RBP4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Ntrk3Q6VNS1 825 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Kyat3Q71RI9 455 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Zfp438Q8BFX2 798 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Q8BGK9 164 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 TiprlQ8BH58 271 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Hook1Q8BIL5 728 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Zcchc4Q8BKW4 512 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Pex5lQ8C437 567 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Unc119bQ8C4B4 251 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Sfrp1Q8C4U3 314 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Proser2Q8C5R2 471 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Wdr26Q8C6G8 641 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 NaprtQ8CC86 538 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Cyp2d26Q8CIM7 500 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Irak3Q8K4B2 609 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Olfr654Q8VF27 341 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Olfr847Q8VFF4 312 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Srgap2Q91Z67 1071 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Slc12a6Q924N4 1150 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Fam69bQ99ML4 431 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Stpg1Q9D2F5 341 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Duoxa2Q9D311 320 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Efhd1Q9D4J1 240 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Alkbh7Q9D6Z0 221 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 AvenQ9D9K3 342 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Ccdc89Q9DA73 370 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Htra2Q9JIY5 458 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Hyou1Q9JKR6 999 aaKnown RBP4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Cyth1Q9QX11 398 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Exo1Q9QZ11 837 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Dok3Q9QZK7 444 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 St6galnac4Q9R2B6 360 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Kcnd2Q9Z0V2 630 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 TfgQ9Z1A1 397 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Sdk2Q6V4S5 2176 aa4.22□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Cyp4f17G3UW78 524 aa4.21□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Cyp2j8G3UZ38 503 aa4.21□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Ube3aO08759 870 aa4.21□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Nek2O35942 443 aa4.21□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Sept7O55131 436 aa4.21□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Shoc2O88520 582 aaKnown RBP4.21□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Pla2g2aP31482 146 aa4.21□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Fpr1P33766 364 aa4.21□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Cxcr2P35343 359 aa4.21□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 HpdP49429 393 aa4.21□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 UrosP51163 265 aa4.21□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Dnajc30P59041 219 aa4.21□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Pip5k1bP70181 539 aa4.21□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Arf5P84084 180 aaKnown RBP4.21□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 TekQ02858 1122 aa4.21□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 LvrnQ2KHK3 559 aa4.21□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Zfp607aQ3TQG9 686 aa4.21□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Prss53Q571E5 552 aa4.21□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Usf1Q61069 310 aa4.21□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 PapolgQ6PCL9 739 aa4.21□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Wdr43Q6ZQL4 677 aaKnown RBP4.21□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Trmt12Q8BG71 446 aa4.21□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Rxfp3Q8BGE9 472 aa4.21□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Best2Q8BGM5 508 aa4.21□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Armcx3Q8BHS6 379 aa4.21□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Serpinb9dQ8BMT0 377 aa4.21□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Gpr180Q8BPS4 441 aa4.21□□□□□ -1.73
Hmgb1-203ENSMUST00000110505 Suds3Q8BR65 328 aa4.21□□□□□ -1.73
Retrieved 100 of 22,080 RNA–protein pairs in 61.4 ms