RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Lrrc3P59034 257 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Ms4a15Q3UPL6 245 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Ephx3Q3V1F8 367 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Phlda1Q62392 405 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Slain1Q68FF7 579 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Olfr1085Q7TR64 313 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Olfr412Q7TRW7 312 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Prpf18Q8BM39 342 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Rdh12Q8BYK4 316 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Abi1Q8CBW3 481 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Txndc11Q8K2W3 948 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Sbk1Q8QZX0 417 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Nae1Q8VBW6 534 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Barhl2Q8VIB5 384 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Far1Q922J9 515 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Npffr2Q924H0 417 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Tmem9Q9CR23 183 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Q9CXL3 195 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Snap29Q9ERB0 260 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Tas2r119Q9JKT2 335 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Baz2bA2AUY4 2123 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Kcna10B2RQA1 511 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Mterf1bB9EJ57 379 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Hoxa9P09631 271 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Dmrtc1bQ2PMX6 267 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Lpcat1Q3TFD2 534 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Mapkapk3Q3UMW7 384 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 IspdQ5RJG7 447 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 FaddQ61160 205 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Vsx2Q61412 361 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Gpr17Q6NS65 339 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Zfp324Q78F42 583 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Acsl5Q8JZR0 683 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Depdc7Q91WS7 511 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Ptgr1Q91YR9 329 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Msh4Q99MT2 958 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 CacybpQ9CXW3 229 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 2610042L04RikQ9D073 150 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Nectin1Q9JKF6 515 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Sae1Q9R1T2 350 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Dock1Q8BUR4 1865 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 5830411N06RikB3F5L4 1112 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 MndalD0QMC3 538 aaKnown RBP11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Olfr376E9Q4M1 320 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Gm4788E9Q8B5 879 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 2210016F16RikG3X8U3 338 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Zmym5Q3U2E2 627 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Hdgfl2Q3UMU9 669 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 MtdhQ80WJ7 579 aaKnown RBP11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Tbc1d10bQ8BHL3 798 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Rbms3Q8BWL5 431 aaKnown RBP11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Kctd11Q8K485 232 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Ing3Q8VEK6 421 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Golga7Q91W53 137 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Znf639Q99KZ6 485 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Nudt17Q9CWD3 296 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Q9CZV2 255 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Rnf146Q9CZW6 359 aa11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Clic1Q9Z1Q5 241 aaKnown RBP11.37□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Gbp4A4UUI3 631 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Skint7A7XV04 395 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Nipsnap3aB1AWZ3 247 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 NfkbieO54910 364 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Fth1P09528 182 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Ugt2b17P17717 530 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 BcheQ03311 603 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Inppl1Q6P549 1257 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 TiprlQ8BH58 271 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Gm6377Q8BHV4 303 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 MylipQ8BM54 445 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Ppp1r3eQ8BRJ4 279 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Lsm14aQ8K2F8 462 aaKnown RBP11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Kcnc4Q8R1C0 628 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Zfp940Q8R2Q3 566 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Tmem161aQ8VCA6 480 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Vps4aQ8VEJ9 437 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Ugt2b38Q91WH2 530 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 KmoQ91WN4 479 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Kiaa2013Q91X21 634 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Prmt3Q922H1 532 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Dpy30Q99LT0 99 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Trim33Q99PP7 1142 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Rfc5Q9D0F6 339 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Tchhl1Q9D3P1 638 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Smg9Q9DB90 520 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 PgdQ9DCD0 483 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Zbtb18Q9WUK6 522 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Kiaa0100Q5SYL3 2234 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 PtprfA2A8L5 1898 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Xpnpep3B7ZMP1 506 aaKnown RBP11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Mybpc1D3YU50 1127 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Vmn2r90E9PXJ8 863 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Prpmp5E9PXN1 296 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Vmn2r35E9Q7U8 861 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Pdha2P35487 391 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Btbd1P58544 488 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Ctps1P70698 591 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Ca4Q64444 305 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Lix1Q6P566 282 aa11.36□□□□□ -0.59
Col9a1-202ENSMUST00000088349 Olfr348Q8VGK3 313 aa11.36□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 47.7 ms