RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Sugp1Q8CH02 643 aaKnown RBP6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 GaleQ8R059 347 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Olfr382Q8VF79 312 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Olfr853Q8VGG6 305 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Lrrc26Q91W20 331 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Hdac11Q91WA3 347 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Pdk3Q922H2 415 aaKnown RBP6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Foxp3Q99JB6 429 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 GatbQ99JT1 557 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 St7Q99M96 577 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Actrt1Q9D9J3 376 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Cab39lQ9DB16 337 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 HemgnQ9ERZ0 503 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Tm9sf3Q9ET30 587 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Slc29a1Q9JIM1 460 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Edf1Q9JMG1 148 aaKnown RBP6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Fer1l5P0DM40 2038 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Hmgxb3G3X9M3 1254 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Socs5O54928 536 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Ncam1P13595 1115 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 F8a1Q00558 380 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Klra4Q60651 263 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Sim1Q61045 765 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Adamtsl4Q80T21 1036 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Serpinb9dQ8BMT0 377 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 LnpepQ8C129 1025 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 PygbQ8CI94 843 aaKnown RBP6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Irf2bp1Q8R3Y8 584 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Olfr273Q8VG87 317 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Tcf7l2Q924A0 459 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Phospho2Q9D9M5 241 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Cyp3a41aQ9JMA7 504 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 NsdhlQ9R1J0 362 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 CalcrlQ9R1W5 463 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Klrc2Q9WTJ9 238 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Gria4Q9Z2W8 902 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Vwa8Q8CC88 1905 aa6.78□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Zfp292Q9Z2U2 2698 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 TriqkB2B9E1 86 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Tsga10ipF7A1F0 157 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Olfr611K7N609 323 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Olfr612L7N462 323 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Phox2bO35690 314 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Il1aP01582 270 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Cd2P08920 344 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Myl2P51667 166 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 1700061G19RikQ08EE8 705 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Faf2Q3TDN2 445 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 MyrfQ3UR85 1138 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Nxpe4Q52KP5 543 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Fam20cQ5MJS3 579 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 MarcoQ60754 518 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Sec24dQ6NXL1 1032 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Q6P1I3 445 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Efr3aQ8BG67 819 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Fbxl4Q8BH70 621 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Kiaa1671Q8BRV5 308 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Sh2d5Q8JZW5 429 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Gfm2Q8R2Q4 779 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Cdhr1Q8VHP6 859 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Adgrl4Q923X1 739 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 CygbQ9CX80 190 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Mgrn1Q9D074 532 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 4930524N10RikQ9D519 233 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Gbe1Q9D6Y9 702 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ten1Q9D7K2 161 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Efcab9Q9DAM2 216 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Sphk2Q9JIA7 617 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 XkQ9QXY7 446 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Capn7Q9R1S8 813 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Tle6Q9WVB3 581 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Racgap1Q9WVM1 628 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 1110002E22RikE0CYV9 1786 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Gm16494E9Q2Z4 87 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 TyrobpO54885 114 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 JunP05627 334 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Lire1P11260 357 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Psmd7P26516 321 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Hnf4aP49698 474 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Fam71bQ5STT6 665 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Klhl5Q6PFE1 708 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Sra1Q80VJ2 232 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Znf879Q8BI99 563 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 UstQ8BUB6 407 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Slc39a13Q8BZH0 361 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ttc22Q8C159 568 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Spz1Q99MY0 378 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ndufa5Q9CPP6 116 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Rpl34Q9D1R9 117 aaKnown RBP6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Arr3Q9EQP6 381 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Vmn2r25W4VSP2 855 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 A0A286YCH8 300 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 3110040M04RikA0A286YDK0 300 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 A0A286YE43 300 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Olfr1188A2AV10 312 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Cyp2j12G3UXT0 502 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 MlxO08609 298 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Igkv7-33P01632 114 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 GhrhrP32082 423 aa6.77□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Usp4P35123 962 aa6.77□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms