RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Olfr1508Q9R0K4 310 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Spin2-ps6A0A140T8V2 174 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 DldO08749 509 aaKnown RBP11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Npy2rP97295 381 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Brf2Q3UAW9 420 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Defa17Q64016 82 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 CltbQ6IRU5 229 aaKnown RBP11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Otop2Q80SX5 563 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 PeloQ80X73 385 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Zfp101Q8BP18 612 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Slco6c1Q8C0X7 706 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Pex5lQ8C437 567 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Ccdc71Q8VEG0 433 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Pcdhb8Q91XZ2 779 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 B9d1Q9R1S0 204 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Olfr220E9Q050 325 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Zfp938E9Q9G3 579 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 CidecP56198 239 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Mrps6P58064 125 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Copz1P61924 177 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 UrodP70697 367 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 StimateQ3UF25 288 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Fam129aQ3UW53 926 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Lrrtm4Q80XG9 590 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Znf750Q8BH05 703 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Abcg4Q91WA9 646 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 TesminQ9WTJ6 475 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Cldn9Q9Z0S7 217 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Zfp969A2ART2 485 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Zfp973A2BE20 318 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Vmn1r76F8VQ63 324 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Psma3O70435 255 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Hcn4O70507 1186 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Col28a1Q2UY11 1141 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Cyb5r2Q3KNK3 276 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Timm8a2Q4FZG7 97 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 4933402J07RikQ8BHX0 270 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Rbms3Q8BWL5 431 aaKnown RBP11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 BtdQ8CIF4 520 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Ccm2Q8K2Y9 453 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 St8sia6Q8K4T1 398 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 KptnQ8VCX6 430 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Fgf22Q9ESS2 162 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Gm28897A0A087WP44 222 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 SelenonD3Z2R5 557 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Elovl3O35949 271 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Suv39h1O54864 412 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 EpxP49290 716 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Adra1bP97717 514 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 MertkQ60805 994 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Dlx3Q64205 287 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Cep78Q6IRU7 790 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Maml1Q6T264 1020 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 PolnQ7TQ07 864 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Olfr834Q7TRG8 312 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Ints14Q8R3P6 515 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Eif3mQ99JX4 374 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Creb3l4Q9D2A5 370 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Dusp21Q9D9D8 189 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 LipaQ9Z0M5 397 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Top3bQ9Z321 862 aaKnown RBP11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Sap18O55128 153 aaKnown RBP11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Grpel2O88396 224 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Lim2P56563 173 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Perm1Q149B8 807 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Zbtb48Q1H9T6 681 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Q3U7U4 132 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Znf366Q6NS86 746 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Csgalnact1Q8BJQ9 530 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Cfap20Q8BTU1 193 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 TpbglQ8C013 384 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Defb36Q8K3U4 67 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 4930550L24RikQ99PA7 320 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Timp4Q9JHB3 224 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Vmn2r88L7N1W8 857 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Socs5O54928 536 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Fut7Q11131 389 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Eif2dQ61211 570 aaKnown RBP11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Olfr366Q7TRY4 309 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Mtg1Q8R2R6 326 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Edem1Q925U4 652 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Pbld1Q9DCG6 288 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Tmem176aQ9DCS1 244 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Slc29a1Q9JIM1 460 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Foxe3Q9QY14 288 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Ltbp2O08999 1813 aa11.67□□□□□ -0.54
Pcif1-201ENSMUST00000041643 GnazO70443 355 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 AladP10518 330 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Actr1aP61164 376 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Taf1cQ6PDZ2 836 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Sema3dQ8BH34 777 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Tmco6Q8BQX5 494 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Sfrp1Q8C4U3 314 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Actr1bQ8R5C5 376 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Olfr1310Q8VF85 312 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 TraipQ8VIG6 470 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Plpp3Q99JY8 312 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 EqtnQ9D9V2 337 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Sppl2aQ9JJF9 523 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Vmn2r22E9Q7S8 853 aa11.66□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms