RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 CLDN19Q8N6F1 224 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 GOLGA6L1Q8N7Z2 621 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 RASGEF1AQ8N9B8 481 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 EXD3Q8N9H8 876 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 ACVR1CQ8NER5 493 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 OR13H1Q8NG92 308 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 FAM45AQ8TCE6 357 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 MAPK15Q8TD08 544 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 LKAAEAR1Q8TD35 194 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 SGF29Q96ES7 293 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 BMFQ96LC9 184 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 SLC46A1Q96NT5 459 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 BIRC8Q96P09 236 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 OLFM1Q99784 485 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 SH3GL2Q99962 352 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 APOOQ9BUR5 198 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 LGR4Q9BXB1 951 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 STMN4Q9H169 189 aaPredicted RBP9.23□□□□□ -0.93
PHGDH-228ENST00000641847 CAB39LQ9H9S4 337 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 TMBIM4Q9HC24 238 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 TRIM39Q9HCM9 518 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 ATXN10Q9UBB4 475 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 SLC39A10Q9ULF5 831 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 SATB2Q9UPW6 733 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 TMEM98Q9Y2Y6 226 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 COMMD10Q9Y6G5 202 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 CENPEQ02224 2701 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 TMEM131Q92545 1883 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 NEMP2A6NFY4 417 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 OR2AG2A6NM03 316 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 IQCF5A8MTL0 148 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 FOXO6A8MYZ6 492 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 E5RI56 91 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 F8W8V4 182 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 H3BMM5 538 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 QSOX1O00391 747 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 VEGFDO43915 354 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 SDC3O75056 442 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 VPS26AO75436 327 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 CDK14O94921 469 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 MT-ND3P03897 115 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 HOXC4P09017 264 aaPredicted RBP9.22□□□□□ -0.93
PHGDH-228ENST00000641847 OR56A5P0C7T3 313 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 CKMT1AP12532 417 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 ZNF8P17098 575 aaPredicted RBP9.22□□□□□ -0.93
PHGDH-228ENST00000641847 ITGB6P18564 788 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 FDXRP22570 491 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 ATP5DP30049 168 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 RABIFP47224 123 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 CTSCP53634 463 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 SLC12A2P55011 1212 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 CDKN2DP55273 166 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 YPEL5P62699 121 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 NFKB2Q00653 900 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 POU4F1Q01851 419 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 TMEM115Q12893 351 aaPredicted RBP9.22□□□□□ -0.93
PHGDH-228ENST00000641847 USP10Q14694 798 aaKnown RBP9.22□□□□□ -0.93
PHGDH-228ENST00000641847 BCL7AQ4VC05 210 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 TTMPQ5BVD1 217 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 TPRG1LQ5T0D9 272 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 CRTC3Q6UUV7 619 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 MACC1Q6ZN28 852 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 Q6ZSR6 202 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 CMC1Q7Z7K0 106 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 PIM3Q86V86 326 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 TRAPPC5Q8IUR0 188 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 KRT222Q8N1A0 295 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 SLC22A18ASQ8N1D0 253 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 ZSCAN1Q8NBB4 408 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 OR4C6Q8NH72 309 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 KCNJ9Q92806 393 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 ISL2Q96A47 359 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 ARL8AQ96BM9 186 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 FAM136AQ96C01 138 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 TSPAN17Q96FV3 270 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 PGM2Q96G03 612 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 WDR92Q96MX6 357 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 TSSK1BQ9BXA7 367 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 SNX15Q9NRS6 342 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 NCKIPSDQ9NZQ3 722 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 TRMT6Q9UJA5 497 aaKnown RBP9.22□□□□□ -0.93
PHGDH-228ENST00000641847 PCDHGA8Q9Y5G5 932 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 HS3ST3A1Q9Y663 406 aa9.22□□□□□ -0.93
PHGDH-228ENST00000641847 ABCA12Q86UK0 2595 aa9.21□□□□□ -0.93
PHGDH-228ENST00000641847 LRP4O75096 1905 aa9.21□□□□□ -0.93
PHGDH-228ENST00000641847 A0A1W2PPM1 405 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 TMEM202A6NGA9 273 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 TRIM38O00635 465 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 TOR1BO14657 336 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 FFAR2O15552 330 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 PHGDHO43175 533 aaKnown RBP9.21□□□□□ -0.94
PHGDH-228ENST00000641847 SGTAO43765 313 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 FTH1P02794 183 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 ALDOAP04075 364 aaKnown RBP9.21□□□□□ -0.94
PHGDH-228ENST00000641847 THEGLP0DJG4 465 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 STMN1P16949 149 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 CHRM3P20309 590 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 KELP23276 732 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 HTR1BP28222 390 aa9.21□□□□□ -0.94
PHGDH-228ENST00000641847 PBLDP30039 288 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms