RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 OR10H5Q8NGA6 315 aa18.21■□□□□ 0.51
SCARB2-213ENST00000638680 BRSK1Q8TDC3 778 aa18.21■□□□□ 0.51
SCARB2-213ENST00000638680 MID1O15344 667 aa18.21■□□□□ 0.51
SCARB2-213ENST00000638680 HCN1O60741 890 aa18.21■□□□□ 0.51
SCARB2-213ENST00000638680 CYP11A1P05108 521 aa18.21■□□□□ 0.51
SCARB2-213ENST00000638680 IMPDH1P20839 514 aa18.21■□□□□ 0.51
SCARB2-213ENST00000638680 CHRNA4P43681 627 aa18.21■□□□□ 0.51
SCARB2-213ENST00000638680 POF1BQ8WVV4 589 aa18.21■□□□□ 0.51
SCARB2-213ENST00000638680 RASSF5Q8WWW0 418 aa18.21■□□□□ 0.51
SCARB2-213ENST00000638680 LRRC58Q96CX6 371 aa18.21■□□□□ 0.51
SCARB2-213ENST00000638680 CDK15Q96Q40 435 aa18.21■□□□□ 0.51
SCARB2-213ENST00000638680 LPIN3Q9BQK8 851 aa18.21■□□□□ 0.51
SCARB2-213ENST00000638680 PHC1P78364 1004 aa18.21■□□□□ 0.51
SCARB2-213ENST00000638680 FAM182AQ5T1J6 154 aa18.21■□□□□ 0.51
SCARB2-213ENST00000638680 FCF1Q9Y324 198 aaKnown RBP18.21■□□□□ 0.51
SCARB2-213ENST00000638680 ZNF432O94892 652 aa18.21■□□□□ 0.51
SCARB2-213ENST00000638680 CDH4P55283 916 aa18.21■□□□□ 0.51
SCARB2-213ENST00000638680 SKA1Q96BD8 255 aa18.21■□□□□ 0.51
SCARB2-213ENST00000638680 SNX27Q96L92 541 aa18.21■□□□□ 0.51
SCARB2-213ENST00000638680 ERN1O75460 977 aaKnown RBP18.2■□□□□ 0.5
SCARB2-213ENST00000638680 ARHGDIBP52566 201 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 ERVK-8P63133 956 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 GANABQ14697 944 aaKnown RBP18.2■□□□□ 0.5
SCARB2-213ENST00000638680 NPY5RQ15761 445 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 LRRC20Q8TCA0 184 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 NEK7Q8TDX7 302 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 ZNF347Q96SE7 839 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 ANKRA2Q9H9E1 313 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 TCAF2A6NFQ2 919 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 CACNB4O00305 520 aaPredicted RBP18.2■□□□□ 0.5
SCARB2-213ENST00000638680 ENPP3O14638 875 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 DPYSL2Q16555 572 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 SMARCD3Q6STE5 483 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 PDSS2Q86YH6 399 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 B3GALT6Q96L58 329 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 GPER1Q99527 375 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 SLC39A3Q9BRY0 314 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 CHIAQ9BZP6 476 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 TMEM59LQ9UK28 342 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 SLIT3O75094 1523 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 ESR1P03372 595 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 ATF4P18848 351 aaPredicted RBP18.2■□□□□ 0.5
SCARB2-213ENST00000638680 S100GP29377 79 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 DAOAP59103 153 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 RAB15P59190 212 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 GPX6P59796 221 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 SIPA1Q96FS4 1042 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 MAGEE1Q9HCI5 957 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 AMBNQ9NP70 447 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 DNAAF2Q9NVR5 837 aaKnown RBP18.2■□□□□ 0.5
SCARB2-213ENST00000638680 EIF3KQ9UBQ5 218 aaKnown RBP18.2■□□□□ 0.5
SCARB2-213ENST00000638680 DCCP43146 1447 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 XKRYO14609 159 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 ADAMTS3O15072 1205 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 CYP3A5P20815 502 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 PTGER3P43115 390 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 EEFSECP57772 596 aaKnown RBP18.2■□□□□ 0.5
SCARB2-213ENST00000638680 ZNF155Q12901 538 aaPredicted RBP18.2■□□□□ 0.5
SCARB2-213ENST00000638680 TAF1AQ15573 450 aaPredicted RBP18.2■□□□□ 0.5
SCARB2-213ENST00000638680 TFB2MQ9H5Q4 396 aaKnown RBP18.2■□□□□ 0.5
SCARB2-213ENST00000638680 AKTIPQ9H8T0 292 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 POLR3BQ9NW08 1133 aaPredicted RBP18.2■□□□□ 0.5
SCARB2-213ENST00000638680 SHPRHQ149N8 1683 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 TMEM233B4DJY2 109 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 TRIM3O75382 744 aaPredicted RBP18.2■□□□□ 0.5
SCARB2-213ENST00000638680 IQCCQ4KMZ1 466 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 CFAP206Q8IYR0 622 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 OR10H4Q8NGA5 316 aa18.2■□□□□ 0.5
SCARB2-213ENST00000638680 FAM124BQ9H5Z6 455 aaPredicted RBP18.2■□□□□ 0.5
SCARB2-213ENST00000638680 CCDC177Q9NQR7 707 aaPredicted RBP18.2■□□□□ 0.5
SCARB2-213ENST00000638680 A0A075B6Q4 140 aa18.19■□□□□ 0.5
SCARB2-213ENST00000638680 ADH1AP07327 375 aa18.19■□□□□ 0.5
SCARB2-213ENST00000638680 GIMD1P0DJR0 217 aa18.19■□□□□ 0.5
SCARB2-213ENST00000638680 PRKAR2AP13861 404 aaKnown RBP18.19■□□□□ 0.5
SCARB2-213ENST00000638680 NT5EP21589 574 aa18.19■□□□□ 0.5
SCARB2-213ENST00000638680 SLC18A1P54219 525 aa18.19■□□□□ 0.5
SCARB2-213ENST00000638680 CASP9P55211 416 aa18.19■□□□□ 0.5
SCARB2-213ENST00000638680 RAB2AP61019 212 aa18.19■□□□□ 0.5
SCARB2-213ENST00000638680 IL10RBQ08334 325 aa18.19■□□□□ 0.5
SCARB2-213ENST00000638680 USP50Q70EL3 339 aaPredicted RBP18.19■□□□□ 0.5
SCARB2-213ENST00000638680 ATCAYQ86WG3 371 aa18.19■□□□□ 0.5
SCARB2-213ENST00000638680 HSPBAP1Q96EW2 488 aa18.19■□□□□ 0.5
SCARB2-213ENST00000638680 NEURL4Q96JN8 1562 aa18.19■□□□□ 0.5
SCARB2-213ENST00000638680 IFI30P13284 250 aa18.19■□□□□ 0.5
SCARB2-213ENST00000638680 TARDBPQ13148 414 aaKnown RBP eCLIP18.19■□□□□ 0.5
SCARB2-213ENST00000638680 PDCD4Q53EL6 469 aaKnown RBP18.19■□□□□ 0.5
SCARB2-213ENST00000638680 UBAP2Q5T6F2 1119 aaKnown RBP18.19■□□□□ 0.5
SCARB2-213ENST00000638680 GJD3Q8N144 294 aa18.19■□□□□ 0.5
SCARB2-213ENST00000638680 CHST4Q8NCG5 386 aa18.19■□□□□ 0.5
SCARB2-213ENST00000638680 TMBIM1Q969X1 311 aa18.19■□□□□ 0.5
SCARB2-213ENST00000638680 KCNC2Q96PR1 638 aa18.19■□□□□ 0.5
SCARB2-213ENST00000638680 POLR2J2Q9GZM3 115 aaKnown RBP18.19■□□□□ 0.5
SCARB2-213ENST00000638680 BCAS3Q9H6U6 928 aa18.19■□□□□ 0.5
SCARB2-213ENST00000638680 ZDHHC2Q9UIJ5 367 aa18.19■□□□□ 0.5
SCARB2-213ENST00000638680 MAZP56270 477 aaKnown RBP18.19■□□□□ 0.5
SCARB2-213ENST00000638680 RPL26P61254 145 aaKnown RBP18.19■□□□□ 0.5
SCARB2-213ENST00000638680 HNRNPDQ14103 355 aaKnown RBP18.19■□□□□ 0.5
SCARB2-213ENST00000638680 SYT16Q17RD7 645 aa18.19■□□□□ 0.5
SCARB2-213ENST00000638680 CYP2U1Q7Z449 544 aa18.19■□□□□ 0.5
SCARB2-213ENST00000638680 PACRGLQ8N7B6 248 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 177.2 ms