RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 PITPNM3Q9BZ71 974 aa13.14□□□□□ -0.31
SOX2-OT-241ENST00000626948 KLHL25Q9H0H3 589 aa13.14□□□□□ -0.31
SOX2-OT-241ENST00000626948 CHST8Q9H2A9 424 aa13.14□□□□□ -0.31
SOX2-OT-241ENST00000626948 XKR8Q9H6D3 395 aa13.14□□□□□ -0.31
SOX2-OT-241ENST00000626948 KCND1Q9NSA2 647 aa13.14□□□□□ -0.31
SOX2-OT-241ENST00000626948 KCND3Q9UK17 655 aa13.14□□□□□ -0.31
SOX2-OT-241ENST00000626948 POLHQ9Y253 713 aa13.14□□□□□ -0.31
SOX2-OT-241ENST00000626948 PLAAQ9Y263 795 aa13.14□□□□□ -0.31
SOX2-OT-241ENST00000626948 CAPN6Q9Y6Q1 641 aa13.14□□□□□ -0.31
SOX2-OT-241ENST00000626948 SEC16AO15027 2179 aa13.14□□□□□ -0.31
SOX2-OT-241ENST00000626948 CCDC88CQ9P219 2028 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 MROH6A6NGR9 719 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 C21orf140B9A014 251 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 TJP3O95049 919 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 CCNYL3P0C7X3 344 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 ITGALP20701 1170 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 PTPN4P29074 926 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 GRIA1P42261 906 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 GABRA4P48169 554 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 LMAN1P49257 510 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 MLLT10P55197 1068 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 SEMA5AQ13591 1074 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 BOP1Q14137 746 aaKnown RBP13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 PRPSAP1Q14558 356 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 POU6F1Q14863 301 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 ZIC1Q15915 447 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 UGT8Q16880 541 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 PARP6Q2NL67 630 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 PRUNE1Q86TP1 453 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 APLFQ8IW19 511 aaPredicted RBP13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 ACVR1CQ8NER5 493 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 ATG4AQ8WYN0 398 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 COL26A1Q96A83 441 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 MIB2Q96AX9 1013 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 ULK4Q96C45 1275 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 ZNF778Q96MU6 729 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 FERD3LQ96RJ6 166 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 ANP32EQ9BTT0 268 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 FAM60AQ9NP50 221 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 PCMTD2Q9NV79 361 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 PCDHB3Q9Y5E6 796 aa13.13□□□□□ -0.31
SOX2-OT-241ENST00000626948 KLHL33A6NCF5 533 aa13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 CPNE3O75131 537 aaKnown RBP13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 AP2A1O95782 977 aa13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 MT-ND3P03897 115 aa13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 ACADLP28330 430 aa13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 FOXN2P32314 431 aa13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 HADHAP40939 763 aa13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 NAP1L1P55209 391 aaKnown RBP13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 PRKG2Q13237 762 aa13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 GSE1Q14687 1217 aa13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 KCTD19Q17RG1 926 aaPredicted RBP13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 GPR33Q49SQ1 333 aa13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 CCDC38Q502W7 563 aa13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 ZRANB3Q5FWF4 1079 aa13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 ZNF385CQ66K41 422 aaPredicted RBP13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 FAM198BQ6UWH4 519 aa13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 CDHR3Q6ZTQ4 885 aa13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 BPHLQ86WA6 291 aaPredicted RBP13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 DSELQ8IZU8 1212 aa13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 LMNTD1Q8N9Z9 388 aa13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 GLIS1Q8NBF1 620 aa13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 OR5AR1Q8NGP9 310 aa13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 OR13J1Q8NGT2 312 aa13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 LCN9Q8WX39 176 aa13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 DCUN1D1Q96GG9 259 aa13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 HES6Q96HZ4 224 aa13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 TRAPPC9Q96Q05 1148 aa13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 CCM2Q9BSQ5 444 aa13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 TFB2MQ9H5Q4 396 aaKnown RBP13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 MLXIPLQ9NP71 852 aa13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 LATS2Q9NRM7 1088 aa13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 C1GALT1Q9NS00 363 aa13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 SLC2A6Q9UGQ3 507 aa13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 ICKQ9UPZ9 632 aa13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 FARSAQ9Y285 508 aaKnown RBP13.12□□□□□ -0.31
SOX2-OT-241ENST00000626948 USP9YO00507 2555 aaPredicted RBP13.11□□□□□ -0.31
SOX2-OT-241ENST00000626948 BHMG1C9JSJ3 638 aaPredicted RBP13.11□□□□□ -0.31
SOX2-OT-241ENST00000626948 MEN1O00255 615 aa13.11□□□□□ -0.31
SOX2-OT-241ENST00000626948 OR1I1O60431 355 aa13.11□□□□□ -0.31
SOX2-OT-241ENST00000626948 RFPL1O75677 317 aa13.11□□□□□ -0.31
SOX2-OT-241ENST00000626948 CDH3P22223 829 aa13.11□□□□□ -0.31
SOX2-OT-241ENST00000626948 NDUFS1P28331 727 aa13.11□□□□□ -0.31
SOX2-OT-241ENST00000626948 PEBP1P30086 187 aaKnown RBP13.11□□□□□ -0.31
SOX2-OT-241ENST00000626948 PTGIRP43119 386 aa13.11□□□□□ -0.31
SOX2-OT-241ENST00000626948 CD151P48509 253 aa13.11□□□□□ -0.31
SOX2-OT-241ENST00000626948 PDE1BQ01064 536 aa13.11□□□□□ -0.31
SOX2-OT-241ENST00000626948 KLRB1Q12918 225 aa13.11□□□□□ -0.31
SOX2-OT-241ENST00000626948 SEMA3AQ14563 771 aa13.11□□□□□ -0.31
SOX2-OT-241ENST00000626948 OASLQ15646 514 aaKnown RBP13.11□□□□□ -0.31
SOX2-OT-241ENST00000626948 IZUMO3Q5VZ72 239 aa13.11□□□□□ -0.31
SOX2-OT-241ENST00000626948 ARHGEF18Q6ZSZ5 1173 aa13.11□□□□□ -0.31
SOX2-OT-241ENST00000626948 ASB18Q6ZVZ8 466 aa13.11□□□□□ -0.31
SOX2-OT-241ENST00000626948 PEX26Q7Z412 305 aa13.11□□□□□ -0.31
SOX2-OT-241ENST00000626948 TRIM73Q86UV7 250 aa13.11□□□□□ -0.31
SOX2-OT-241ENST00000626948 TMEM126BQ8IUX1 230 aa13.11□□□□□ -0.31
SOX2-OT-241ENST00000626948 CARFQ8N187 725 aa13.11□□□□□ -0.31
SOX2-OT-241ENST00000626948 OR52K1Q8NGK4 314 aa13.11□□□□□ -0.31
SOX2-OT-241ENST00000626948 STYXQ8WUJ0 223 aa13.11□□□□□ -0.31
SOX2-OT-241ENST00000626948 MR1Q95460 341 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms