RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 ANKS3Q6ZW76 656 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 THAP5Q7Z6K1 395 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 LIX1Q8N485 282 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 ZNF548Q8NEK5 533 aaPredicted RBP11.05□□□□□ -0.64
VARS2-213ENST00000625423 TUBA1CQ9BQE3 449 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 GORASP2Q9H8Y8 452 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 EIF3LQ9Y262 564 aaKnown RBP11.05□□□□□ -0.64
VARS2-213ENST00000625423 TDRKHQ9Y2W6 561 aaKnown RBP11.05□□□□□ -0.64
VARS2-213ENST00000625423 RGS14O43566 566 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 FZD6O60353 706 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 NOL3O60936 208 aaKnown RBP11.05□□□□□ -0.64
VARS2-213ENST00000625423 SLC25A14O95258 325 aaPredicted RBP11.05□□□□□ -0.64
VARS2-213ENST00000625423 ZNF7P17097 686 aaPredicted RBP11.05□□□□□ -0.64
VARS2-213ENST00000625423 AKT1P31749 480 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 GRSF1Q12849 480 aaKnown RBP eCLIP11.05□□□□□ -0.645e-13■■□□□ 11.5
VARS2-213ENST00000625423 BROXQ5VW32 411 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 R3HCC1LQ7Z5L2 792 aaKnown RBP11.05□□□□□ -0.64
VARS2-213ENST00000625423 NECAB2Q7Z6G3 386 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 RNF180Q86T96 592 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 ZC3H7AQ8IWR0 971 aaKnown RBP11.05□□□□□ -0.64
VARS2-213ENST00000625423 SLC22A17Q8WUG5 538 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 BCL7CQ8WUZ0 217 aaPredicted RBP11.05□□□□□ -0.64
VARS2-213ENST00000625423 TANKQ92844 425 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 SDCCAG3Q96C92 435 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 CCDC115Q96NT0 180 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 FAM126AQ9BYI3 521 aaPredicted RBP11.05□□□□□ -0.64
VARS2-213ENST00000625423 TM6SF2Q9BZW4 377 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 DPY30Q9C005 99 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 SLC25A37Q9NYZ2 338 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 WWOXQ9NZC7 414 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 TMEM88BA6NKF7 163 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 GOLGA8CPA6NN73 597 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 K7ERQ8 282 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 GAPDHSO14556 408 aaPredicted RBP11.05□□□□□ -0.64
VARS2-213ENST00000625423 GNGT2O14610 69 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 GLUD1P00367 558 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 UGT1A1P22309 533 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 UGT1A4P22310 534 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 UGT1A3P35503 534 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 UGT1A5P35504 534 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 GTDC1Q4AE62 458 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 XAF1Q6GPH4 301 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 CERS6Q6ZMG9 384 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 MSRB3Q8IXL7 192 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 C8orf59Q8N0T1 100 aaPredicted RBP11.05□□□□□ -0.64
VARS2-213ENST00000625423 AADATQ8N5Z0 425 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 BPIFB6Q8NFQ5 453 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 CLHC1Q8NHS4 586 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 C2orf15Q8WU43 125 aaKnown RBP11.05□□□□□ -0.64
VARS2-213ENST00000625423 SNX19Q92543 992 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 BHMTQ93088 406 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 SLC47A1Q96FL8 570 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 GLT1D1Q96MS3 346 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 CWH43Q9H720 699 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 ASB8Q9H765 288 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 FAM118AQ9NWS6 357 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 OARD1Q9Y530 152 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 PCDHGA8Q9Y5G5 932 aa11.05□□□□□ -0.64
VARS2-213ENST00000625423 C2orf78A6NCI8 922 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 TRIM64BA6NI03 449 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 SEC22BO75396 215 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 PRKD3O94806 890 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 GALTP07902 379 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 CRHBPP24387 322 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 MAP4P27816 1152 aaKnown RBP11.04□□□□□ -0.64
VARS2-213ENST00000625423 OR1D2P34982 312 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 PIGAP37287 484 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 RGS4P49798 205 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 TPD52P55327 224 aaPredicted RBP11.04□□□□□ -0.64
VARS2-213ENST00000625423 NFATC3Q12968 1075 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 CBX2Q14781 532 aaPredicted RBP11.04□□□□□ -0.64
VARS2-213ENST00000625423 IMPG1Q17R60 797 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 ANKRD26P1Q6NSI1 321 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 PHACTR4Q8IZ21 702 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 DBF4BQ8NFT6 615 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 FAM162AQ96A26 154 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 ACDQ96AP0 544 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 MTFMTQ96DP5 389 aaKnown RBP11.04□□□□□ -0.64
VARS2-213ENST00000625423 LHPPQ9H008 270 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 ACTR8Q9H981 624 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 MAGEE1Q9HCI5 957 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 OPTCQ9UBM4 332 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 DNAJB9Q9UBS3 223 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 ZNF490Q9ULM2 529 aaPredicted RBP11.04□□□□□ -0.64
VARS2-213ENST00000625423 ELOVL7A1L3X0 281 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 CXCR6O00574 342 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 CA12O43570 354 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 TBL1XO60907 577 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 ULK1O75385 1050 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 PGRP06401 933 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 SLC10A3P09131 477 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 CCNA2P20248 432 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 MEP1AQ16819 746 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 ARMC12Q5T9G4 340 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 SPESP1Q6UW49 350 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 SUSD1Q6UWL2 747 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 MBOAT1Q6ZNC8 495 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 Q6ZNX1 250 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 RAET1EQ8TD07 263 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 AURKBQ96GD4 344 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms