RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 GORASP1Q9BQQ3 440 aa18.42■□□□□ 0.54
SMN1-211ENST00000625245 KLHL25Q9H0H3 589 aa18.42■□□□□ 0.54
SMN1-211ENST00000625245 SYTL2Q9HCH5 934 aa18.42■□□□□ 0.54
SMN1-211ENST00000625245 PCMTD2Q9NV79 361 aa18.42■□□□□ 0.54
SMN1-211ENST00000625245 SERTAD3Q9UJW9 196 aa18.42■□□□□ 0.54
SMN1-211ENST00000625245 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.42■□□□□ 0.54
SMN1-211ENST00000625245 PCDHGB7Q9Y5F8 929 aa18.42■□□□□ 0.54
SMN1-211ENST00000625245 MACROD2A1Z1Q3 448 aa18.41■□□□□ 0.54
SMN1-211ENST00000625245 CFAP99D6REC4 459 aa18.41■□□□□ 0.54
SMN1-211ENST00000625245 IFRD1O00458 451 aaPredicted RBP18.41■□□□□ 0.54
SMN1-211ENST00000625245 BTN3A3O00478 584 aa18.41■□□□□ 0.54
SMN1-211ENST00000625245 CCL22O00626 93 aa18.41■□□□□ 0.54
SMN1-211ENST00000625245 SEMA7AO75326 666 aa18.41■□□□□ 0.54
SMN1-211ENST00000625245 CEACAM4O75871 244 aa18.41■□□□□ 0.54
SMN1-211ENST00000625245 CRTAMO95727 393 aa18.41■□□□□ 0.54
SMN1-211ENST00000625245 ATXN8OSP0DMR3 200 aa18.41■□□□□ 0.54
SMN1-211ENST00000625245 ATP1B2P14415 290 aaPredicted RBP18.41■□□□□ 0.54
SMN1-211ENST00000625245 PVRP15151 417 aa18.41■□□□□ 0.54
SMN1-211ENST00000625245 ITGALP20701 1170 aa18.41■□□□□ 0.54
SMN1-211ENST00000625245 ADRA1AP35348 466 aa18.41■□□□□ 0.54
SMN1-211ENST00000625245 RORAP35398 523 aa18.41■□□□□ 0.54
SMN1-211ENST00000625245 PRLHRP49683 370 aa18.41■□□□□ 0.54
SMN1-211ENST00000625245 NXPE1Q8N323 547 aa18.41■□□□□ 0.54
SMN1-211ENST00000625245 ZBTB2Q8N680 514 aa18.41■□□□□ 0.54
SMN1-211ENST00000625245 COPS8Q99627 209 aa18.41■□□□□ 0.54
SMN1-211ENST00000625245 NUDT9Q9BW91 350 aa18.41■□□□□ 0.54
SMN1-211ENST00000625245 CASS4Q9NQ75 786 aa18.41■□□□□ 0.54
SMN1-211ENST00000625245 BTN3A1O00481 513 aa18.4■□□□□ 0.54
SMN1-211ENST00000625245 CAPN1P07384 714 aa18.4■□□□□ 0.54
SMN1-211ENST00000625245 PSMB4P28070 264 aa18.4■□□□□ 0.54
SMN1-211ENST00000625245 RAPSNQ13702 412 aa18.4■□□□□ 0.54
SMN1-211ENST00000625245 EIF2S3LQ2VIR3 472 aaKnown RBP18.4■□□□□ 0.54
SMN1-211ENST00000625245 ZNF789Q5FWF6 425 aa18.4■□□□□ 0.54
SMN1-211ENST00000625245 ZNF449Q6P9G9 518 aa18.4■□□□□ 0.54
SMN1-211ENST00000625245 FAM198BQ6UWH4 519 aa18.4■□□□□ 0.54
SMN1-211ENST00000625245 BBS12Q6ZW61 710 aa18.4■□□□□ 0.54
SMN1-211ENST00000625245 TMEM102Q8N9M5 508 aaPredicted RBP18.4■□□□□ 0.54
SMN1-211ENST00000625245 HEXDCQ8WVB3 486 aa18.4■□□□□ 0.54
SMN1-211ENST00000625245 KRT35Q92764 455 aa18.4■□□□□ 0.54
SMN1-211ENST00000625245 XKR8Q9H6D3 395 aa18.4■□□□□ 0.54
SMN1-211ENST00000625245 COG4Q9H9E3 785 aa18.4■□□□□ 0.54
SMN1-211ENST00000625245 GPR83Q9NYM4 423 aa18.4■□□□□ 0.54
SMN1-211ENST00000625245 AAR2Q9Y312 384 aaKnown RBP18.4■□□□□ 0.54
SMN1-211ENST00000625245 NOTCH2Q04721 2471 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 C17orf113A0A1B0GUU1 675 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 C9J4A7 227 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 AKR1B15C9JRZ8 316 aaPredicted RBP18.39■□□□□ 0.53
SMN1-211ENST00000625245 E7EQ34 232 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 APOC4-APOC2K7ER74 178 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 APOC2P02655 101 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 AGXTP21549 392 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 CTNNA2P26232 953 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 OTX2P32243 289 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 RRADP55042 308 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 HADHBP55084 474 aaKnown RBP18.39■□□□□ 0.53
SMN1-211ENST00000625245 PRKG2Q13237 762 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 MRPL49Q13405 166 aaKnown RBP18.39■□□□□ 0.53
SMN1-211ENST00000625245 ATP1A4Q13733 1029 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 SPARCL1Q14515 664 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 NCF4Q15080 339 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 KYNUQ16719 465 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 ANKRD20A2Q5SQ80 823 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 ANKRD20A1Q5TYW2 823 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 ANKRD20A3Q5VUR7 823 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 MED25Q71SY5 747 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 SNX20Q7Z614 316 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 HOOK3Q86VS8 718 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 CNGA4Q8IV77 575 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 RBMXL3Q8N7X1 1067 aaKnown RBP18.39■□□□□ 0.53
SMN1-211ENST00000625245 OR52E1Q8NGJ3 308 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 ACTL9Q8TC94 416 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 N4BP2L2Q92802 583 aaPredicted RBP18.39■□□□□ 0.53
SMN1-211ENST00000625245 SGSM3Q96HU1 749 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 TRAPPC9Q96Q05 1148 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 FAM118BQ9BPY3 351 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 HGH1Q9BTY7 390 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 OR52A5Q9H2C5 316 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 TFR2Q9UP52 801 aa18.39■□□□□ 0.53
SMN1-211ENST00000625245 CACNA1DQ01668 2161 aa18.38■□□□□ 0.53
SMN1-211ENST00000625245 TEX15Q9BXT5 2789 aa18.38■□□□□ 0.53
SMN1-211ENST00000625245 A1L4Q6 167 aa18.38■□□□□ 0.53
SMN1-211ENST00000625245 AGAP14A8MT82 685 aa18.38■□□□□ 0.53
SMN1-211ENST00000625245 C2orf74A8MZ97 194 aa18.38■□□□□ 0.53
SMN1-211ENST00000625245 TCP11X1B4DZS4 312 aa18.38■□□□□ 0.53
SMN1-211ENST00000625245 KCNN4O15554 427 aa18.38■□□□□ 0.53
SMN1-211ENST00000625245 ZNF749O43361 778 aa18.38■□□□□ 0.53
SMN1-211ENST00000625245 STK10O94804 968 aaKnown RBP18.38■□□□□ 0.53
SMN1-211ENST00000625245 PDHA2P29803 388 aa18.38■□□□□ 0.53
SMN1-211ENST00000625245 MC4RP32245 332 aa18.38■□□□□ 0.53
SMN1-211ENST00000625245 HADHAP40939 763 aa18.38■□□□□ 0.53
SMN1-211ENST00000625245 CDKN1CP49918 316 aaPredicted RBP18.38■□□□□ 0.53
SMN1-211ENST00000625245 ZNF140P52738 457 aaPredicted RBP18.38■□□□□ 0.53
SMN1-211ENST00000625245 OTUD4Q01804 1114 aaKnown RBP18.38■□□□□ 0.53
SMN1-211ENST00000625245 ZRANB3Q5FWF4 1079 aa18.38■□□□□ 0.53
SMN1-211ENST00000625245 MLIPQ5VWP3 458 aa18.38■□□□□ 0.53
SMN1-211ENST00000625245 SLC6A19Q695T7 634 aa18.38■□□□□ 0.53
SMN1-211ENST00000625245 DARS2Q6PI48 645 aaKnown RBP18.38■□□□□ 0.53
SMN1-211ENST00000625245 SARM1Q6SZW1 724 aa18.38■□□□□ 0.53
SMN1-211ENST00000625245 TAS2R42Q7RTR8 314 aa18.38■□□□□ 0.53
SMN1-211ENST00000625245 AMIGO1Q86WK6 493 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms