RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 SPESP1Q6UW49 350 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 ARHGAP36Q6ZRI8 547 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 BPIFB2Q8N4F0 458 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 EZH1Q92800 747 aaPredicted RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 BORCS8Q96FH0 119 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 TBCBQ99426 244 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 C20orf96Q9NUD7 363 aaPredicted RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 RWDD2AQ9UIY3 292 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 PCDHGB1Q9Y5G3 927 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 A0A1W2PP18 115 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 ILVBLA1L0T0 632 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 FUOMA2VDF0 154 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 UPK3BL1B0FP48 263 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 UPK3BL2E5RIL1 263 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 RGS16O15492 202 aaPredicted RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 TRIM13O60858 407 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 DCTP40126 519 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 USP46P62068 366 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 FLOT2Q14254 428 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 SPARCL1Q14515 664 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 CST6Q15828 149 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 ADAMTSL2Q86TH1 951 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 PNLDC1Q8NA58 520 aaKnown RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.3□□□□□ -1.88
LPP-220ENST00000617246 ABCB8Q9NUT2 735 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 PTTG2Q9NZH5 202 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 ZNF346Q9UL40 294 aaKnown RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 DLGAP4Q9Y2H0 992 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 M0R129 80 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 PROM1O43490 865 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 RGS20O76081 388 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 ACPPP15309 386 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 ILKQ13418 452 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 STK11Q15831 433 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 DUSP6Q16828 381 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 HSP90AA4PQ58FG1 418 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 SYDE1Q6ZW31 735 aaPredicted RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 BTN2A1Q7KYR7 527 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 FUKQ8N0W3 1084 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 SLC2A14Q8TDB8 520 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 CLPTM1LQ96KA5 538 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 LTB4R2Q9NPC1 389 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 AP3M1Q9Y2T2 418 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 OR2AG2A6NM03 316 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 OR2B3O76000 313 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 AOC1P19801 751 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 C4BPBP20851 252 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 PLEKHG4Q58EX7 1191 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 C6orf183Q5T699 404 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 CDKAL1Q5VV42 579 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 GRHL2Q6ISB3 625 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 OPN5Q6U736 354 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 CLEC2AQ6UVW9 174 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 Q6ZSR6 202 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 EGFL6Q8IUX8 553 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 PCYOX1LQ8NBM8 494 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 OCEL1Q9H607 264 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 LRFN1Q9P244 771 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 TRHDEQ9UKU6 1024 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 SLC9A8Q9Y2E8 581 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 ALPK3Q96L96 1907 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 GON4LQ3T8J9 2241 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 LOC105369274A0A096LPK9 316 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 LINC01553A4QN01 128 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 NUDT17P0C025 328 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 FDPSP14324 419 aaKnown RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 TATDN3Q17R31 274 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 C9orf57Q5W0N0 161 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 SHC4Q6S5L8 630 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 OR4N4Q8N0Y3 316 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 ZFP41Q8N8Y5 198 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 LRRC39Q96DD0 335 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 CHMP1AQ9HD42 196 aaPredicted RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 AGO1Q9UL18 857 aaKnown RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 CACNG2Q9Y698 323 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 PDCD5O14737 125 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 CSO75390 466 aaKnown RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 PAK4O96013 591 aaPredicted RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 QDPRP09417 244 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 ZNF37AP17032 561 aaPredicted RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 LGALS3BPQ08380 585 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 FAM91A1Q658Y4 838 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 USP49Q70CQ1 688 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 SLC4A11Q8NBS3 891 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 PLA2G15Q8NCC3 412 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 ZNF669Q96BR6 464 aaPredicted RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 PCSK1NQ9UHG2 260 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 A0A0D9SFI3 127 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 DCNP07585 359 aaKnown RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 CPN2P22792 545 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 TYK2P29597 1187 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 MAGEA2P43356 314 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 ST3GAL4Q11206 333 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 GRIN2CQ14957 1233 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 FASTKD3Q14CZ7 662 aaKnown RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 WDR93Q6P2C0 686 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 C17orf107Q6ZR85 190 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 TRAPPC6BQ86SZ2 158 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 C1orf87Q8N0U7 546 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 ZCCHC10Q8TBK6 192 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms