RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 RAB43Q86YS6 212 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 OR5K1Q8NHB7 308 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 AFG1LQ8WV93 481 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 MRGPRX2Q96LB1 330 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 AGAP4Q96P64 663 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 NEDD4LQ96PU5 975 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 TRNT1Q96Q11 434 aaKnown RBP6.56□□□□□ -1.36
LMO3-235ENST00000616247 FCRL5Q96RD9 977 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 TSPAN18Q96SJ8 248 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 GPR21Q99679 349 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 OR2B2Q9GZK3 357 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 SLIRPQ9GZT3 109 aaKnown RBP6.56□□□□□ -1.36
LMO3-235ENST00000616247 MMP28Q9H239 520 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 OR51E2Q9H255 320 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 THG1LQ9NWX6 298 aaKnown RBP6.56□□□□□ -1.36
LMO3-235ENST00000616247 TAS2R9Q9NYW1 312 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 NUFIP1Q9UHK0 495 aaKnown RBP6.56□□□□□ -1.36
LMO3-235ENST00000616247 HACL1Q9UJ83 578 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 UBQLN1Q9UMX0 589 aaKnown RBP6.56□□□□□ -1.36
LMO3-235ENST00000616247 RNF6Q9Y252 685 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 MOXD2PA6NHM9 499 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 OR6C70A6NIJ9 312 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 SEC22BO75396 215 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 EEDO75530 441 aaKnown RBP6.56□□□□□ -1.36
LMO3-235ENST00000616247 MATN4O95460 622 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 S1PR4O95977 384 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 DNAJB2P25686 324 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 POU1F1P28069 291 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 SOX6P35712 828 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 LIPAP38571 399 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 CTSKP43235 329 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 KRT6CP48668 564 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 GMPSP49915 693 aaPredicted RBP6.56□□□□□ -1.36
LMO3-235ENST00000616247 FAM189BP81408 668 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 C18orf21Q32NC0 220 aaPredicted RBP6.56□□□□□ -1.36
LMO3-235ENST00000616247 PLEKHG6Q3KR16 790 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 TJAP1Q5JTD0 557 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 SPANXN4Q5MJ08 99 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 ZNF648Q5T619 568 aaPredicted RBP6.56□□□□□ -1.36
LMO3-235ENST00000616247 MARC1Q5VT66 337 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 CES5AQ6NT32 575 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 LYPD8Q6UX82 237 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 ZNF517Q6ZMY9 492 aaPredicted RBP6.56□□□□□ -1.36
LMO3-235ENST00000616247 CATSPERGQ6ZRH7 1159 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 SCN4BQ8IWT1 228 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 GOLM1Q8NBJ4 401 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 OR56A4Q8NGH8 313 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 OR2T11Q8NH01 316 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 PROKR1Q8TCW9 393 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 HASPINQ8TF76 798 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 ULK4Q96C45 1275 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 FCRL2Q96LA5 508 aaPredicted RBP6.56□□□□□ -1.36
LMO3-235ENST00000616247 ASB2Q96Q27 587 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 OR52E6Q96RD3 313 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 ZNF717Q9BY31 904 aaPredicted RBP6.56□□□□□ -1.36
LMO3-235ENST00000616247 MMP27Q9H306 513 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 SP140LQ9H930 580 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 ACOT13Q9NPJ3 140 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 FBXO8Q9NRD0 319 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 STMN3Q9NZ72 180 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 OPTCQ9UBM4 332 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 PCDHGB6Q9Y5F9 930 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 PNMA8CA0A1B0GUJ8 204 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 ISPDA4D126 451 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 EFCAB10A6NFE3 127 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 C12orf71A8MTZ7 269 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 J3KR12 359 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 M0R129 80 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 VPS4BO75351 444 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 C22orf31O95567 290 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 COL6A1P12109 1028 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 POLR2EP19388 210 aaKnown RBP6.55□□□□□ -1.36
LMO3-235ENST00000616247 PRKACBP22694 351 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 IL12RB1P42701 662 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 POLD2P49005 469 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 DAOAP59103 153 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 GABARAPL2P60520 117 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 SLC10A7Q0GE19 358 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 KRR1Q13601 381 aaKnown RBP6.55□□□□□ -1.36
LMO3-235ENST00000616247 ACOX1Q15067 660 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 ARMCX4Q5H9R4 360 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 ZNF691Q5VV52 312 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 TWF2Q6IBS0 349 aaKnown RBP6.55□□□□□ -1.36
LMO3-235ENST00000616247 DLK2Q6UY11 383 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 C11orf74Q86VG3 221 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 GPSM1Q86YR5 675 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 FAM217AQ8IXS0 508 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 NLGN4XQ8N0W4 816 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 CAMKK1Q8N5S9 505 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 PHF10Q8WUB8 498 aaKnown RBP6.55□□□□□ -1.36
LMO3-235ENST00000616247 TRIM63Q969Q1 353 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 UBXN10Q96LJ8 280 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 ZFP42Q96MM3 310 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 KCNC2Q96PR1 638 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 FYTTD1Q96QD9 318 aaKnown RBP6.55□□□□□ -1.36
LMO3-235ENST00000616247 TAS2R13Q9NYV9 303 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 AFF4Q9UHB7 1163 aaKnown RBP6.55□□□□□ -1.36
LMO3-235ENST00000616247 RAPGEFL1Q9UHV5 662 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 PKP3Q9Y446 797 aa6.55□□□□□ -1.36
LMO3-235ENST00000616247 LOXHD1Q8IVV2 1947 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms