RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 TRNAU1APQ9NX07 287 aaKnown RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 CNOT6Q9ULM6 557 aaKnown RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 PCDHGA11Q9Y5H2 935 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 ZFP37Q9Y6Q3 630 aaPredicted RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 PHRF1Q9P1Y6 1649 aaKnown RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 SCN2BO60939 215 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 H6PDO95479 791 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 NPPAP01160 153 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 VIPP01282 170 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 GNAZP19086 355 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 GSTM3P21266 225 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 NMBRP28336 390 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 EEFSECP57772 596 aaKnown RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 ECT2LQ008S8 904 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 KCTD8Q6ZWB6 473 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 FUBP3Q96I24 572 aaKnown RBP eCLIP4.5□□□□□ -1.691e-6■■□□□ 12.9
CHD9-221ENST00000615216 MND1Q9BWT6 205 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 HIPK3Q9H422 1215 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 KAT8Q9H7Z6 458 aaKnown RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 DUS2Q9NX74 493 aaKnown RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 TMA7Q9Y2S6 64 aaKnown RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 CLDN25C9JDP6 229 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 PRAMEF12O95522 483 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 RENP00797 406 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 PEPDP12955 493 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 CHRNB2P17787 502 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 HCAR3P49019 387 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 ERVK-21P61565 698 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 EIF5AP63241 154 aaKnown RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 RASGEF1BQ0VAM2 473 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 SUZ12Q15022 739 aaKnown RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 RBM20Q5T481 1227 aaKnown RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 SERPINA9Q86WD7 417 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 TMEM126BQ8IUX1 230 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 ZNF781Q8N8C0 355 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 SLAIN1Q8ND83 568 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 B3GALT6Q96L58 329 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 NSMCE3Q96MG7 304 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 PRRG4Q9BZD6 226 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 DEC1Q9P2X7 70 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 AQP12BA6NM10 295 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 TACSTD2P09758 323 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 FAM163BP0C2L3 166 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 ITIH1P19827 911 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 SLC1A2P43004 574 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 ARCN1P48444 511 aaKnown RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 DSC2Q02487 901 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 PPIGQ13427 754 aaKnown RBP eCLIP4.5□□□□□ -1.69
CHD9-221ENST00000615216 NAE1Q13564 534 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 LIN52Q52LA3 116 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 AQP12AQ8IXF9 295 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 SLC13A3Q8WWT9 602 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 LPGAT1Q92604 370 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 ASB9Q96DX5 294 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 TSSK3Q96PN8 268 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 FAM83DQ9H4H8 585 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 CHRAC1Q9NRG0 131 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 GIN1Q9NXP7 522 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 RBM7Q9Y580 266 aaKnown RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 DGKBQ9Y6T7 804 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 A8MUI8 341 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 KMOO15229 486 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 DUSP11O75319 330 aaKnown RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 UGT2B4P06133 528 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 ABATP80404 500 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 IQCCQ4KMZ1 466 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 SDHAF4Q5VUM1 108 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 EEF1DP3Q658K8 133 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 CLEC6AQ6EIG7 209 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 USP30Q70CQ3 517 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 MCEMP1Q8IX19 187 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 KLHL36Q8N4N3 616 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 ZNF548Q8NEK5 533 aaPredicted RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 SMG7Q92540 1137 aaKnown RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 EXOSC8Q96B26 276 aaKnown RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 KLHL5Q96PQ7 755 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 TUBGCP5Q96RT8 1024 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 USP29Q9HBJ7 922 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 ZNF304Q9HCX3 659 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 POFUT2Q9Y2G5 429 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 GRIP1Q9Y3R0 1128 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 IQCMA0A1B0GVH7 501 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 WRBO00258 174 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 MATN2O00339 956 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 PIP5K1BO14986 540 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 CYB5AP00167 134 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 DNAJA1P31689 397 aaKnown RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 PPP2R2BQ00005 443 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 GBE1Q04446 702 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 NOGQ13253 232 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 ADGRD2Q7Z7M1 963 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 ZDHHC21Q8IVQ6 265 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 FITM2Q8N6M3 262 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 SIDT2Q8NBJ9 832 aaKnown RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 HTRA1Q92743 480 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 SCGB3A2Q96PL1 93 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 MRPS30Q9NP92 439 aaKnown RBP4.5□□□□□ -1.69
CHD9-221ENST00000615216 SEC14L4Q9UDX3 406 aa4.5□□□□□ -1.69
CHD9-221ENST00000615216 CFL2Q9Y281 166 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms