RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 USP7Q93009 1102 aa16.29■□□□□ 0.2
CBWD3-211ENST00000615061 TMEM159Q96B96 161 aa16.29■□□□□ 0.2
CBWD3-211ENST00000615061 SNF8Q96H20 258 aa16.29■□□□□ 0.2
CBWD3-211ENST00000615061 C9orf72Q96LT7 481 aa16.29■□□□□ 0.2
CBWD3-211ENST00000615061 HGH1Q9BTY7 390 aa16.29■□□□□ 0.2
CBWD3-211ENST00000615061 CARD6Q9BX69 1037 aa16.29■□□□□ 0.2
CBWD3-211ENST00000615061 PLAC1Q9HBJ0 212 aa16.29■□□□□ 0.2
CBWD3-211ENST00000615061 C20orf96Q9NUD7 363 aaPredicted RBP16.29■□□□□ 0.2
CBWD3-211ENST00000615061 FOXJ2Q9P0K8 574 aa16.29■□□□□ 0.2
CBWD3-211ENST00000615061 AKAP7Q9P0M2 348 aaPredicted RBP16.29■□□□□ 0.2
CBWD3-211ENST00000615061 GNPTGQ9UJJ9 305 aa16.29■□□□□ 0.2
CBWD3-211ENST00000615061 COLEC10Q9Y6Z7 277 aa16.29■□□□□ 0.2
CBWD3-211ENST00000615061 ADAMTS20P59510 1910 aa16.29■□□□□ 0.2
CBWD3-211ENST00000615061 EFCAB7A8K855 629 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 C9orf172C9J069 976 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 PRAMEF10O60809 474 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 NIPSNAP2O75323 286 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 PGAM1P18669 254 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 OGNP20774 298 aaKnown RBP16.28■□□□□ 0.2
CBWD3-211ENST00000615061 RPS3P23396 243 aaKnown RBP eCLIP16.28■□□□□ 0.2
CBWD3-211ENST00000615061 ITPKBP27987 946 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 CD151P48509 253 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 SEPHS1P49903 392 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 PCBP4P57723 403 aaKnown RBP16.28■□□□□ 0.2
CBWD3-211ENST00000615061 CRYMQ14894 314 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 LONRF1Q17RB8 773 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 ZNF449Q6P9G9 518 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 OR4E2Q8NGC2 313 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 HNRNPLLQ8WVV9 542 aaKnown RBP16.28■□□□□ 0.2
CBWD3-211ENST00000615061 ART4Q93070 314 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 EBNA1BP2Q99848 306 aaKnown RBP16.28■□□□□ 0.2
CBWD3-211ENST00000615061 DPH5Q9H2P9 285 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 FBXO6Q9NRD1 293 aaPredicted RBP16.28■□□□□ 0.2
CBWD3-211ENST00000615061 HRASLS2Q9NWW9 162 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 ASF1AQ9Y294 204 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 HEBP2Q9Y5Z4 205 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 FAM169AQ9Y6X4 670 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 SMG1Q96Q15 3661 aaKnown RBP16.28■□□□□ 0.2
CBWD3-211ENST00000615061 OR6C74A6NCV1 312 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 GPC4O75487 556 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 RASSF9O75901 435 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 KRT37O76014 449 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 S1PR4O95977 384 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 AOAHP28039 575 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 SLC1A2P43004 574 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 THOC5Q13769 683 aaKnown RBP16.28■□□□□ 0.2
CBWD3-211ENST00000615061 HSP90AA5PQ58FG0 334 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 C19orf48Q6RUI8 117 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 PDIK1LQ8N165 341 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 BMPERQ8N8U9 685 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.28■□□□□ 0.2
CBWD3-211ENST00000615061 ACVR1CQ8NER5 493 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 OR52E1Q8NGJ3 308 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 ZFPM2Q8WW38 1151 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 ZNF592Q92610 1267 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 TCF12Q99081 682 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 XKR8Q9H6D3 395 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 GALPQ9UBC7 116 aa16.28■□□□□ 0.2
CBWD3-211ENST00000615061 ATMQ13315 3056 aa16.27■□□□□ 0.2
CBWD3-211ENST00000615061 IGSF10Q6WRI0 2623 aa16.27■□□□□ 0.2
CBWD3-211ENST00000615061 A0A087WV48 116 aa16.27■□□□□ 0.2
CBWD3-211ENST00000615061 OR5K3A6NET4 321 aa16.27■□□□□ 0.2
CBWD3-211ENST00000615061 URI1O94763 535 aaPredicted RBP16.27■□□□□ 0.2
CBWD3-211ENST00000615061 ERVK-10P10266 1014 aa16.27■□□□□ 0.2
CBWD3-211ENST00000615061 NDUFS1P28331 727 aa16.27■□□□□ 0.2
CBWD3-211ENST00000615061 ELK3P41970 407 aa16.27■□□□□ 0.2
CBWD3-211ENST00000615061 MPP1Q00013 466 aa16.27■□□□□ 0.2
CBWD3-211ENST00000615061 DNAJC21Q5F1R6 531 aaKnown RBP16.27■□□□□ 0.2
CBWD3-211ENST00000615061 RNF187Q5TA31 235 aaPredicted RBP16.27■□□□□ 0.2
CBWD3-211ENST00000615061 KCNMB4Q86W47 210 aa16.27■□□□□ 0.2
CBWD3-211ENST00000615061 SLC22A15Q8IZD6 547 aa16.27■□□□□ 0.2
CBWD3-211ENST00000615061 ASZ1Q8WWH4 475 aa16.27■□□□□ 0.2
CBWD3-211ENST00000615061 LCN9Q8WX39 176 aa16.27■□□□□ 0.2
CBWD3-211ENST00000615061 CRELD1Q96HD1 420 aa16.27■□□□□ 0.2
CBWD3-211ENST00000615061 PPM1MQ96MI6 270 aa16.27■□□□□ 0.2
CBWD3-211ENST00000615061 CTRCQ99895 268 aa16.27■□□□□ 0.2
CBWD3-211ENST00000615061 APMAPQ9HDC9 416 aa16.27■□□□□ 0.2
CBWD3-211ENST00000615061 IARS2Q9NSE4 1012 aaKnown RBP16.27■□□□□ 0.2
CBWD3-211ENST00000615061 EPHA6Q9UF33 1036 aa16.27■□□□□ 0.2
CBWD3-211ENST00000615061 CHMP2BQ9UQN3 213 aa16.27■□□□□ 0.2
CBWD3-211ENST00000615061 PCDHGA7Q9Y5G6 932 aa16.27■□□□□ 0.2
CBWD3-211ENST00000615061 ANKRD12Q6UB98 2062 aa16.27■□□□□ 0.19
CBWD3-211ENST00000615061 F8W8V4 182 aa16.26■□□□□ 0.19
CBWD3-211ENST00000615061 TPBGLP0DKB5 382 aa16.26■□□□□ 0.19
CBWD3-211ENST00000615061 POLR2CP19387 275 aaPredicted RBP16.26■□□□□ 0.19
CBWD3-211ENST00000615061 MLLT3P42568 568 aaPredicted RBP16.26■□□□□ 0.19
CBWD3-211ENST00000615061 SH3BP2P78314 561 aa16.26■□□□□ 0.19
CBWD3-211ENST00000615061 FASTKD3Q14CZ7 662 aaKnown RBP16.26■□□□□ 0.19
CBWD3-211ENST00000615061 HIF1AQ16665 826 aa16.26■□□□□ 0.19
CBWD3-211ENST00000615061 CACHD1Q5VU97 1274 aa16.26■□□□□ 0.19
CBWD3-211ENST00000615061 LRRC6Q86X45 466 aa16.26■□□□□ 0.19
CBWD3-211ENST00000615061 ZNF248Q8NDW4 579 aa16.26■□□□□ 0.19
CBWD3-211ENST00000615061 CFAP61Q8NHU2 1237 aa16.26■□□□□ 0.19
CBWD3-211ENST00000615061 ZDHHC12Q96GR4 267 aa16.26■□□□□ 0.19
CBWD3-211ENST00000615061 PANX3Q96QZ0 392 aa16.26■□□□□ 0.19
CBWD3-211ENST00000615061 MAP3K3Q99759 626 aa16.26■□□□□ 0.19
CBWD3-211ENST00000615061 ERP44Q9BS26 406 aa16.26■□□□□ 0.19
CBWD3-211ENST00000615061 TSSK1BQ9BXA7 367 aa16.26■□□□□ 0.19
CBWD3-211ENST00000615061 RAB33BQ9H082 229 aa16.26■□□□□ 0.19
CBWD3-211ENST00000615061 MVB12BQ9H7P6 319 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms