RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 ADAMTS17Q8TE56 1095 aa17.34■□□□□ 0.37
SMN2-213ENST00000614240 N4BP2L2Q92802 583 aaPredicted RBP17.34■□□□□ 0.37
SMN2-213ENST00000614240 KLHL25Q9H0H3 589 aa17.34■□□□□ 0.37
SMN2-213ENST00000614240 VPS37BQ9H9H4 285 aa17.34■□□□□ 0.37
SMN2-213ENST00000614240 AKR1B15C9JRZ8 316 aaPredicted RBP17.33■□□□□ 0.36
SMN2-213ENST00000614240 E7EQ34 232 aa17.33■□□□□ 0.36
SMN2-213ENST00000614240 BTN3A3O00478 584 aa17.33■□□□□ 0.36
SMN2-213ENST00000614240 BTN3A1O00481 513 aa17.33■□□□□ 0.36
SMN2-213ENST00000614240 SGTAO43765 313 aa17.33■□□□□ 0.36
SMN2-213ENST00000614240 CEACAM4O75871 244 aa17.33■□□□□ 0.36
SMN2-213ENST00000614240 SORBS2O94875 1100 aaKnown RBP17.33■□□□□ 0.36
SMN2-213ENST00000614240 ST6GAL1P15907 406 aa17.33■□□□□ 0.36
SMN2-213ENST00000614240 AGXTP21549 392 aa17.33■□□□□ 0.36
SMN2-213ENST00000614240 PSMB4P28070 264 aa17.33■□□□□ 0.36
SMN2-213ENST00000614240 RORAP35398 523 aa17.33■□□□□ 0.36
SMN2-213ENST00000614240 HADHAP40939 763 aa17.33■□□□□ 0.36
SMN2-213ENST00000614240 LMAN1P49257 510 aa17.33■□□□□ 0.36
SMN2-213ENST00000614240 HADHBP55084 474 aaKnown RBP17.33■□□□□ 0.36
SMN2-213ENST00000614240 ITGA1P56199 1179 aa17.33■□□□□ 0.36
SMN2-213ENST00000614240 XIAPP98170 497 aa17.33■□□□□ 0.36
SMN2-213ENST00000614240 OLIG2Q13516 323 aa17.33■□□□□ 0.36
SMN2-213ENST00000614240 SARM1Q6SZW1 724 aa17.33■□□□□ 0.36
SMN2-213ENST00000614240 SNX20Q7Z614 316 aa17.33■□□□□ 0.36
SMN2-213ENST00000614240 RAB43Q86YS6 212 aa17.33■□□□□ 0.36
SMN2-213ENST00000614240 HPS6Q86YV9 775 aa17.33■□□□□ 0.36
SMN2-213ENST00000614240 CDKL3Q8IVW4 592 aaPredicted RBP17.33■□□□□ 0.36
SMN2-213ENST00000614240 LRRC45Q96CN5 670 aa17.33■□□□□ 0.36
SMN2-213ENST00000614240 SGSM3Q96HU1 749 aa17.33■□□□□ 0.36
SMN2-213ENST00000614240 SLC29A3Q9BZD2 475 aa17.33■□□□□ 0.36
SMN2-213ENST00000614240 CASS4Q9NQ75 786 aa17.33■□□□□ 0.36
SMN2-213ENST00000614240 PCMTD2Q9NV79 361 aa17.33■□□□□ 0.36
SMN2-213ENST00000614240 GPR83Q9NYM4 423 aa17.33■□□□□ 0.36
SMN2-213ENST00000614240 PADI2Q9Y2J8 665 aa17.33■□□□□ 0.36
SMN2-213ENST00000614240 TNRC6AQ8NDV7 1962 aaKnown RBP17.33■□□□□ 0.36
SMN2-213ENST00000614240 C17orf113A0A1B0GUU1 675 aa17.32■□□□□ 0.36
SMN2-213ENST00000614240 C2orf74A8MZ97 194 aa17.32■□□□□ 0.36
SMN2-213ENST00000614240 HBQ1P09105 142 aa17.32■□□□□ 0.36
SMN2-213ENST00000614240 ATXN8OSP0DMR3 200 aa17.32■□□□□ 0.36
SMN2-213ENST00000614240 PVRP15151 417 aa17.32■□□□□ 0.36
SMN2-213ENST00000614240 VARSP26640 1264 aaKnown RBP17.32■□□□□ 0.36
SMN2-213ENST00000614240 ADRA1AP35348 466 aa17.32■□□□□ 0.36
SMN2-213ENST00000614240 KYNUQ16719 465 aa17.32■□□□□ 0.36
SMN2-213ENST00000614240 ZRANB3Q5FWF4 1079 aa17.32■□□□□ 0.36
SMN2-213ENST00000614240 ANKRD20A2Q5SQ80 823 aa17.32■□□□□ 0.36
SMN2-213ENST00000614240 ANKRD20A1Q5TYW2 823 aa17.32■□□□□ 0.36
SMN2-213ENST00000614240 ANKRD20A3Q5VUR7 823 aa17.32■□□□□ 0.36
SMN2-213ENST00000614240 DARS2Q6PI48 645 aaKnown RBP17.32■□□□□ 0.36
SMN2-213ENST00000614240 FAM198BQ6UWH4 519 aa17.32■□□□□ 0.36
SMN2-213ENST00000614240 TAS2R42Q7RTR8 314 aa17.32■□□□□ 0.36
SMN2-213ENST00000614240 AMIGO1Q86WK6 493 aa17.32■□□□□ 0.36
SMN2-213ENST00000614240 GPR135Q8IZ08 494 aa17.32■□□□□ 0.36
SMN2-213ENST00000614240 ACTL9Q8TC94 416 aa17.32■□□□□ 0.36
SMN2-213ENST00000614240 TBL1YQ9BQ87 522 aa17.32■□□□□ 0.36
SMN2-213ENST00000614240 DPH2Q9BQC3 489 aaPredicted RBP17.32■□□□□ 0.36
SMN2-213ENST00000614240 GORASP1Q9BQQ3 440 aa17.32■□□□□ 0.36
SMN2-213ENST00000614240 NUDT9Q9BW91 350 aa17.32■□□□□ 0.36
SMN2-213ENST00000614240 XKR8Q9H6D3 395 aa17.32■□□□□ 0.36
SMN2-213ENST00000614240 MVB12BQ9H7P6 319 aa17.32■□□□□ 0.36
SMN2-213ENST00000614240 COG4Q9H9E3 785 aa17.32■□□□□ 0.36
SMN2-213ENST00000614240 USP9XQ93008 2570 aaPredicted RBP17.32■□□□□ 0.36
SMN2-213ENST00000614240 RP1L1Q8IWN7 2480 aaPredicted RBP17.31■□□□□ 0.36
SMN2-213ENST00000614240 CCL22O00626 93 aa17.31■□□□□ 0.36
SMN2-213ENST00000614240 KCNN4O15554 427 aa17.31■□□□□ 0.36
SMN2-213ENST00000614240 ZNF749O43361 778 aa17.31■□□□□ 0.36
SMN2-213ENST00000614240 SEMA7AO75326 666 aa17.31■□□□□ 0.36
SMN2-213ENST00000614240 OTX2P32243 289 aa17.31■□□□□ 0.36
SMN2-213ENST00000614240 MC4RP32245 332 aa17.31■□□□□ 0.36
SMN2-213ENST00000614240 EIF3EP60228 445 aaKnown RBP17.31■□□□□ 0.36
SMN2-213ENST00000614240 OTUD4Q01804 1114 aaKnown RBP17.31■□□□□ 0.36
SMN2-213ENST00000614240 PRKG2Q13237 762 aa17.31■□□□□ 0.36
SMN2-213ENST00000614240 RAPSNQ13702 412 aa17.31■□□□□ 0.36
SMN2-213ENST00000614240 ATP1A4Q13733 1029 aa17.31■□□□□ 0.36
SMN2-213ENST00000614240 NCF4Q15080 339 aa17.31■□□□□ 0.36
SMN2-213ENST00000614240 PRR30Q53SZ7 412 aaPredicted RBP17.31■□□□□ 0.36
SMN2-213ENST00000614240 C11orf63Q6NUN7 778 aa17.31■□□□□ 0.36
SMN2-213ENST00000614240 ZBTB2Q8N680 514 aa17.31■□□□□ 0.36
SMN2-213ENST00000614240 OR52E1Q8NGJ3 308 aa17.31■□□□□ 0.36
SMN2-213ENST00000614240 PRR7Q8TB68 274 aa17.31■□□□□ 0.36
SMN2-213ENST00000614240 KRT35Q92764 455 aa17.31■□□□□ 0.36
SMN2-213ENST00000614240 PPP1R2P1Q96PQ5 205 aa17.31■□□□□ 0.36
SMN2-213ENST00000614240 TRAPPC9Q96Q05 1148 aa17.31■□□□□ 0.36
SMN2-213ENST00000614240 HGH1Q9BTY7 390 aa17.31■□□□□ 0.36
SMN2-213ENST00000614240 OR52A5Q9H2C5 316 aa17.31■□□□□ 0.36
SMN2-213ENST00000614240 TFB2MQ9H5Q4 396 aaKnown RBP17.31■□□□□ 0.36
SMN2-213ENST00000614240 ZDHHC3Q9NYG2 299 aa17.31■□□□□ 0.36
SMN2-213ENST00000614240 ACTR10Q9NZ32 417 aa17.31■□□□□ 0.36
SMN2-213ENST00000614240 GPN3Q9UHW5 284 aaPredicted RBP17.31■□□□□ 0.36
SMN2-213ENST00000614240 AGAP14A8MT82 685 aa17.3■□□□□ 0.36
SMN2-213ENST00000614240 TCP11X1B4DZS4 312 aa17.3■□□□□ 0.36
SMN2-213ENST00000614240 CAPN1P07384 714 aa17.3■□□□□ 0.36
SMN2-213ENST00000614240 MSL3P1P0C860 447 aa17.3■□□□□ 0.36
SMN2-213ENST00000614240 PDHA2P29803 388 aa17.3■□□□□ 0.36
SMN2-213ENST00000614240 CD151P48509 253 aa17.3■□□□□ 0.36
SMN2-213ENST00000614240 ZNF140P52738 457 aaPredicted RBP17.3■□□□□ 0.36
SMN2-213ENST00000614240 COPS2P61201 443 aa17.3■□□□□ 0.36
SMN2-213ENST00000614240 SPARCL1Q14515 664 aa17.3■□□□□ 0.36
SMN2-213ENST00000614240 SPA17Q15506 151 aa17.3■□□□□ 0.36
SMN2-213ENST00000614240 EIF2S3LQ2VIR3 472 aaKnown RBP17.3■□□□□ 0.36
SMN2-213ENST00000614240 GPR33Q49SQ1 333 aa17.3■□□□□ 0.36
SMN2-213ENST00000614240 ZNF789Q5FWF6 425 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms