RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 CTSLP07711 333 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 EBLN1P0CF75 366 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 MSH3P20585 1137 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 XPAP23025 273 aaPredicted RBP13.34□□□□□ -0.27
NEK3-205ENST00000610828 HMGCS1Q01581 520 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 UBE3AQ05086 875 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 BNIP2Q12982 314 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 DHCR24Q15392 516 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 TLR1Q15399 786 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 OR52E8Q6IFG1 317 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 SLC2A7Q6PXP3 512 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 SPPL2CQ8IUH8 684 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 CHCHD4Q8N4Q1 142 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 TMEM125Q96AQ2 219 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 PPP3R2Q96LZ3 170 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 LRRC3BQ96PB8 259 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 NTMT1Q9BV86 223 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 SLC2A11Q9BYW1 496 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 ALG2Q9H553 416 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 FAM8A1Q9UBU6 413 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 IL36AQ9UHA7 158 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 ZNF490Q9ULM2 529 aaPredicted RBP13.34□□□□□ -0.27
NEK3-205ENST00000610828 SOBPA7XYQ1 873 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 UPK3BL1B0FP48 263 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 UPK3BL2E5RIL1 263 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 SLC9A3R1O14745 358 aaPredicted RBP13.34□□□□□ -0.27
NEK3-205ENST00000610828 ARHGEF15O94989 841 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 HIST1H2AGP0C0S8 130 aaPredicted RBP13.34□□□□□ -0.27
NEK3-205ENST00000610828 LINGO3P0C6S8 592 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 MYOGP15173 224 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 SYN1P17600 705 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 HIST1H2ADP20671 130 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 SOX11P35716 441 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 DGKGP49619 791 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 PDK3Q15120 406 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 IMPG1Q17R60 797 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 AAK1Q2M2I8 961 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 METTL2BQ6P1Q9 378 aaKnown RBP13.34□□□□□ -0.27
NEK3-205ENST00000610828 KIAA2013Q8IYS2 634 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 BEND7Q8N7W2 519 aaPredicted RBP13.34□□□□□ -0.27
NEK3-205ENST00000610828 ITFG1Q8TB96 612 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 NUDT8Q8WV74 236 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 HIST1H2AHQ96KK5 128 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 TMEM74Q96NL1 305 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 HIST1H2AJQ99878 128 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 H2AFJQ9BTM1 129 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 TRIM15Q9C019 465 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 ACTL8Q9H568 366 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 ACTR8Q9H981 624 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 PIDD1Q9HB75 910 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 PARVBQ9HBI1 364 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 INTS7Q9NVH2 962 aaKnown RBP13.34□□□□□ -0.27
NEK3-205ENST00000610828 TRPS1Q9UHF7 1281 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 ZNHIT2Q9UHR6 403 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 CCL27Q9Y4X3 112 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 AK5Q9Y6K8 562 aa13.34□□□□□ -0.27
NEK3-205ENST00000610828 OR2AG2A6NM03 316 aa13.33□□□□□ -0.28
NEK3-205ENST00000610828 CFAP99D6REC4 459 aa13.33□□□□□ -0.28
NEK3-205ENST00000610828 EIF3FO00303 357 aaPredicted RBP13.33□□□□□ -0.28
NEK3-205ENST00000610828 ZNF197O14709 1029 aa13.33□□□□□ -0.28
NEK3-205ENST00000610828 RSL1D1O76021 490 aaKnown RBP13.33□□□□□ -0.28
NEK3-205ENST00000610828 C8GP07360 202 aa13.33□□□□□ -0.28
NEK3-205ENST00000610828 TIMP2P16035 220 aa13.33□□□□□ -0.28
NEK3-205ENST00000610828 CPSF6Q16630 551 aaKnown RBP eCLIP13.33□□□□□ -0.28
NEK3-205ENST00000610828 TCEAL5Q5H9L2 206 aa13.33□□□□□ -0.28
NEK3-205ENST00000610828 AMIGO2Q86SJ2 522 aa13.33□□□□□ -0.28
NEK3-205ENST00000610828 ZUFSPQ96AP4 578 aa13.33□□□□□ -0.28
NEK3-205ENST00000610828 MTFMTQ96DP5 389 aaKnown RBP13.33□□□□□ -0.28
NEK3-205ENST00000610828 DUS3LQ96G46 650 aaKnown RBP13.33□□□□□ -0.28
NEK3-205ENST00000610828 RIOK2Q9BVS4 552 aaKnown RBP13.33□□□□□ -0.28
NEK3-205ENST00000610828 SLC12A9Q9BXP2 914 aa13.33□□□□□ -0.28
NEK3-205ENST00000610828 Q9H521 79 aa13.33□□□□□ -0.28
NEK3-205ENST00000610828 SLC32A1Q9H598 525 aa13.33□□□□□ -0.28
NEK3-205ENST00000610828 ZFP14Q9HCL3 533 aa13.33□□□□□ -0.28
NEK3-205ENST00000610828 TMEM45AQ9NWC5 275 aa13.33□□□□□ -0.28
NEK3-205ENST00000610828 SMOXQ9NWM0 555 aa13.33□□□□□ -0.28
NEK3-205ENST00000610828 DUS2Q9NX74 493 aaKnown RBP13.33□□□□□ -0.28
NEK3-205ENST00000610828 CNOT6Q9ULM6 557 aaKnown RBP13.33□□□□□ -0.28
NEK3-205ENST00000610828 SUFUQ9UMX1 484 aa13.33□□□□□ -0.28
NEK3-205ENST00000610828 AURKCQ9UQB9 309 aa13.33□□□□□ -0.28
NEK3-205ENST00000610828 RWDD3Q9Y3V2 267 aa13.33□□□□□ -0.28
NEK3-205ENST00000610828 KRT87PA6NCN2 255 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 SLC28A1O00337 649 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 ARPC2O15144 300 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 AKAP10O43572 662 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 NUAK1O60285 661 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 TIPRLO75663 272 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 CLDN9O95484 217 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 CYP17A1P05093 508 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 ENO2P09104 434 aaPredicted RBP13.32□□□□□ -0.28
NEK3-205ENST00000610828 NFKBIAP25963 317 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 RANBP2P49792 3224 aaKnown RBP13.32□□□□□ -0.28
NEK3-205ENST00000610828 GSK3BP49841 420 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 LIPEQ05469 1076 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 PTGR1Q14914 329 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 NRF1Q16656 503 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 ZNF805Q5CZA5 627 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 MTX3Q5HYI7 312 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 ZNF648Q5T619 568 aaPredicted RBP13.32□□□□□ -0.28
NEK3-205ENST00000610828 NANOGP8Q6NSW7 305 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms