RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 CLDN9O95484 217 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 PGRP06401 933 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 RPS14P62263 151 aaKnown RBP6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 ZNF846Q147U1 533 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 ZNF284Q2VY69 593 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 INO80DQ53TQ3 878 aaPredicted RBP6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 MBOAT1Q6ZNC8 495 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 GALNT10Q86SR1 603 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 ZNF605Q86T29 641 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 FUNDC1Q8IVP5 155 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 PIANPQ8IYJ0 282 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 ADGRG5Q8IZF4 528 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 PIK3C3Q8NEB9 887 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 GANCQ8TET4 914 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 GAB3Q8WWW8 586 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 FUBP1Q96AE4 644 aaKnown RBP6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 MYRFLQ96LU7 910 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 FAM210AQ96ND0 272 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 SYT17Q9BSW7 474 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 CEP44Q9C0F1 390 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 ATP13A3Q9H7F0 1226 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 PALMDQ9NP74 551 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 MIEF1Q9NQG6 463 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 C8orf4Q9NR00 106 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 SDR39U1Q9NRG7 319 aaPredicted RBP6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 OLAHQ9NV23 265 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 C1orf109Q9NX04 203 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 ZIM2Q9NZV7 527 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 PADI4Q9UM07 663 aa6.75□□□□□ -1.33
SYNPO2-206ENST00000610556 DYTNA2CJ06 578 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 OR2AG2A6NM03 316 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 SLC38A8A6NNN8 435 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 GJB5O95377 273 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 LRG1P02750 347 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 URODP06132 367 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 UGT2B4P06133 528 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 ALDH3A2P51648 485 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 DGKEP52429 567 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 TXNL4AP83876 142 aaKnown RBP6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 GTDC1Q4AE62 458 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 DEPDC1Q5TB30 811 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 ENPP6Q6UWR7 440 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 TMEM207Q6UWW9 146 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 CERS6Q6ZMG9 384 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 TRMT11Q7Z4G4 463 aaKnown RBP6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 P2RY8Q86VZ1 359 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 HIPK1Q86Z02 1210 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 CNTN4Q8IWV2 1026 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 ARL14EPQ8N8R7 260 aaPredicted RBP6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 TAMM41Q96BW9 452 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 ZNF599Q96NL3 588 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 ACAT2Q9BWD1 397 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 MAP10Q9P2G4 905 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 PTBP2Q9UKA9 531 aaKnown RBP6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 PSME2Q9UL46 239 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 PCDHB1Q9Y5F3 818 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 FPGTO14772 594 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 CLDN7O95471 211 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 ENO2P09104 434 aaPredicted RBP6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 ZNF865P0CJ78 1059 aaPredicted RBP6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 HOXD10P28358 340 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 ATP4BP51164 291 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 INHBCP55103 352 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 ERVPABLB-1P60509 514 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 MYBPC3Q14896 1274 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 ABRAXAS2Q15018 415 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 C11orf91Q3C1V1 193 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 ZNF829Q3KNS6 432 aaPredicted RBP6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 RFTN2Q52LD8 501 aaPredicted RBP6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 RAB41Q5JT25 222 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 RSBN1Q5VWQ0 802 aaPredicted RBP6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 USP45Q70EL2 814 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 C2orf73Q8N5S3 287 aaPredicted RBP6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 SMYD1Q8NB12 490 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 CNIH3Q8TBE1 160 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 FNDC8Q8TC99 324 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 NELL1Q92832 810 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 UPF1Q92900 1129 aaKnown RBP eCLIP6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 ISL2Q96A47 359 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 GPR62Q9BZJ7 368 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 NUAK2Q9H093 628 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 OSER1Q9NX31 292 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 LMCD1Q9NZU5 365 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 RAPGEFL1Q9UHV5 662 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 RPS6KA6Q9UK32 745 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 PHF24Q9UPV7 400 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 TESMINQ9Y4I5 508 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 TRIM17Q9Y577 477 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 SCN1AP35498 2009 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 PRR23AA6NEV1 266 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 H0Y858 1186 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 K7EPI3 171 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 RGS10O43665 173 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 SCELO95171 688 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 ATE1O95260 518 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 PGLSO95336 258 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 BMP10O95393 424 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 MED26O95402 600 aa6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 PENKP01210 267 aaPredicted RBP6.74□□□□□ -1.33
SYNPO2-206ENST00000610556 GSTM1P09488 218 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms