RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 ZNF846Q147U1 533 aa14.41□□□□□ -0.1
CTCFL-219ENST00000608720 KIAA0040Q15053 153 aa14.41□□□□□ -0.1
CTCFL-219ENST00000608720 KCNJ8Q15842 424 aa14.41□□□□□ -0.1
CTCFL-219ENST00000608720 SMU1Q2TAY7 513 aa14.41□□□□□ -0.1
CTCFL-219ENST00000608720 RFTN2Q52LD8 501 aaPredicted RBP14.41□□□□□ -0.1
CTCFL-219ENST00000608720 XAF1Q6GPH4 301 aa14.41□□□□□ -0.1
CTCFL-219ENST00000608720 SLC24A5Q71RS6 500 aa14.41□□□□□ -0.1
CTCFL-219ENST00000608720 RTN4RL1Q86UN2 441 aaPredicted RBP14.41□□□□□ -0.1
CTCFL-219ENST00000608720 SVOPLQ8N434 492 aa14.41□□□□□ -0.1
CTCFL-219ENST00000608720 CARNMT1Q8N4J0 409 aa14.41□□□□□ -0.1
CTCFL-219ENST00000608720 TTC30BQ8N4P2 665 aa14.41□□□□□ -0.1
CTCFL-219ENST00000608720 PDZD8Q8NEN9 1154 aa14.41□□□□□ -0.1
CTCFL-219ENST00000608720 SLC13A3Q8WWT9 602 aa14.41□□□□□ -0.1
CTCFL-219ENST00000608720 FIG4Q92562 907 aa14.41□□□□□ -0.1
CTCFL-219ENST00000608720 ALPK1Q96QP1 1244 aa14.41□□□□□ -0.1
CTCFL-219ENST00000608720 CDK5RAP1Q96SZ6 601 aaKnown RBP14.41□□□□□ -0.1
CTCFL-219ENST00000608720 FEM1AQ9BSK4 669 aa14.41□□□□□ -0.1
CTCFL-219ENST00000608720 P2RY12Q9H244 342 aa14.41□□□□□ -0.1
CTCFL-219ENST00000608720 ADNPQ9H2P0 1102 aa14.41□□□□□ -0.1
CTCFL-219ENST00000608720 BPIFA1Q9NP55 256 aa14.41□□□□□ -0.1
CTCFL-219ENST00000608720 FAM118AQ9NWS6 357 aa14.41□□□□□ -0.1
CTCFL-219ENST00000608720 KLHL3Q9UH77 587 aa14.41□□□□□ -0.1
CTCFL-219ENST00000608720 EIF3LQ9Y262 564 aaKnown RBP14.41□□□□□ -0.1
CTCFL-219ENST00000608720 AP3M1Q9Y2T2 418 aa14.41□□□□□ -0.1
CTCFL-219ENST00000608720 PCDHGC4Q9Y5F7 938 aa14.41□□□□□ -0.1
CTCFL-219ENST00000608720 ILVBLA1L0T0 632 aa14.4□□□□□ -0.1
CTCFL-219ENST00000608720 J3QRK9 145 aa14.4□□□□□ -0.1
CTCFL-219ENST00000608720 ZNF182P17025 639 aaPredicted RBP14.4□□□□□ -0.1
CTCFL-219ENST00000608720 AKT1P31749 480 aa14.4□□□□□ -0.1
CTCFL-219ENST00000608720 MAD2L1Q13257 205 aaPredicted RBP14.4□□□□□ -0.1
CTCFL-219ENST00000608720 ABRAXAS2Q15018 415 aa14.4□□□□□ -0.1
CTCFL-219ENST00000608720 TRIM71Q2Q1W2 868 aaKnown RBP14.4□□□□□ -0.1
CTCFL-219ENST00000608720 FAM171A1Q5VUB5 890 aa14.4□□□□□ -0.1
CTCFL-219ENST00000608720 MFSD14CQ5VZR4 134 aa14.4□□□□□ -0.1
CTCFL-219ENST00000608720 R3HCC1LQ7Z5L2 792 aaKnown RBP14.4□□□□□ -0.1
CTCFL-219ENST00000608720 MILR1Q7Z6M3 343 aa14.4□□□□□ -0.1
CTCFL-219ENST00000608720 ZC3H7AQ8IWR0 971 aaKnown RBP14.4□□□□□ -0.1
CTCFL-219ENST00000608720 EFHBQ8N7U6 833 aa14.4□□□□□ -0.1
CTCFL-219ENST00000608720 OR52E4Q8NGH9 312 aa14.4□□□□□ -0.1
CTCFL-219ENST00000608720 FBXL8Q96CD0 374 aa14.4□□□□□ -0.1
CTCFL-219ENST00000608720 SH3GL1Q99961 368 aa14.4□□□□□ -0.1
CTCFL-219ENST00000608720 OSBPL10Q9BXB5 764 aa14.4□□□□□ -0.1
CTCFL-219ENST00000608720 USE1Q9NZ43 259 aa14.4□□□□□ -0.1
CTCFL-219ENST00000608720 DNMT3LQ9UJW3 386 aa14.4□□□□□ -0.1
CTCFL-219ENST00000608720 NOD1Q9Y239 953 aa14.4□□□□□ -0.1
CTCFL-219ENST00000608720 PCDHB1Q9Y5F3 818 aa14.4□□□□□ -0.1
CTCFL-219ENST00000608720 MAGED1Q9Y5V3 778 aaPredicted RBP14.4□□□□□ -0.1
CTCFL-219ENST00000608720 ANKRD36A6QL64 1941 aa14.4□□□□□ -0.1
CTCFL-219ENST00000608720 MTMR11A4FU01 709 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 RAD51BO15315 384 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 RGS14O43566 566 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 SCELO95171 688 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 CST1P01037 141 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 RHOCP08134 193 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 CNPP09543 421 aaKnown RBP14.39□□□□□ -0.11
CTCFL-219ENST00000608720 SLC2A4P14672 509 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 PCYT1AP49585 367 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 TPD52P55327 224 aaPredicted RBP14.39□□□□□ -0.11
CTCFL-219ENST00000608720 GABARAPL2P60520 117 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 CACNG1Q06432 222 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 TOP3AQ13472 1001 aaPredicted RBP14.39□□□□□ -0.11
CTCFL-219ENST00000608720 CAMK2BQ13554 666 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 C6orf141Q5SZD1 244 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 SPARTQ8N0X7 666 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 GLB1L3Q8NCI6 653 aaPredicted RBP14.39□□□□□ -0.11
CTCFL-219ENST00000608720 PJA1Q8NG27 643 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 SLC22A17Q8WUG5 538 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 RBM4BQ9BQ04 359 aaKnown RBP14.39□□□□□ -0.11
CTCFL-219ENST00000608720 THUMPD3Q9BV44 507 aaKnown RBP14.39□□□□□ -0.11
CTCFL-219ENST00000608720 RBM4Q9BWF3 364 aaKnown RBP14.39□□□□□ -0.11
CTCFL-219ENST00000608720 LHPPQ9H008 270 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 IPPKQ9H8X2 491 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 VAPAQ9P0L0 249 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 LIMD1Q9UGP4 676 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 ADGRE2Q9UHX3 823 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 FNDC3AQ9Y2H6 1198 aaKnown RBP14.39□□□□□ -0.11
CTCFL-219ENST00000608720 IFT52Q9Y366 437 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 NEUROG3Q9Y4Z2 214 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 TRPM7Q96QT4 1865 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.39□□□□□ -0.11
CTCFL-219ENST00000608720 IQCF5A8MTL0 148 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 PRMT5O14744 637 aaPredicted RBP14.39□□□□□ -0.11
CTCFL-219ENST00000608720 DFNA5O60443 496 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 ATP5C1P36542 298 aaKnown RBP14.39□□□□□ -0.11
CTCFL-219ENST00000608720 RPS24P62847 133 aaKnown RBP14.39□□□□□ -0.11
CTCFL-219ENST00000608720 FAM189BP81408 668 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 CYP4F3Q08477 520 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 GPR17Q13304 367 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 ZNF177Q13360 481 aaPredicted RBP14.39□□□□□ -0.11
CTCFL-219ENST00000608720 KCNA10Q16322 511 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 C18orf21Q32NC0 220 aaPredicted RBP14.39□□□□□ -0.11
CTCFL-219ENST00000608720 GTF2IRD2BQ6EKJ0 949 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 GTF2IRD2Q86UP8 949 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 BPIFB6Q8NFQ5 453 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 GTF2H4Q92759 462 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 SLC47A1Q96FL8 570 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 HBEGFQ99075 208 aa14.39□□□□□ -0.11
CTCFL-219ENST00000608720 WDR12Q9GZL7 423 aaKnown RBP14.39□□□□□ -0.11
CTCFL-219ENST00000608720 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.39□□□□□ -0.11
CTCFL-219ENST00000608720 DAPK2Q9UIK4 370 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms