RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 ACVR1CQ8NER5 493 aa13.91□□□□□ -0.18
CTSA-219ENST00000607841 FAM45AQ8TCE6 357 aa13.91□□□□□ -0.18
CTSA-219ENST00000607841 FBF1Q8TES7 1133 aa13.91□□□□□ -0.18
CTSA-219ENST00000607841 SKA2Q8WVK7 121 aaPredicted RBP13.91□□□□□ -0.18
CTSA-219ENST00000607841 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.91□□□□□ -0.18
CTSA-219ENST00000607841 INPP5DQ92835 1189 aa13.91□□□□□ -0.18
CTSA-219ENST00000607841 FAM136AQ96C01 138 aa13.91□□□□□ -0.18
CTSA-219ENST00000607841 TMEM74Q96NL1 305 aa13.91□□□□□ -0.18
CTSA-219ENST00000607841 CPNE1Q99829 537 aa13.91□□□□□ -0.18
CTSA-219ENST00000607841 TBC1D10AQ9BXI6 508 aa13.91□□□□□ -0.18
CTSA-219ENST00000607841 KIR3DX1Q9H7L2 352 aa13.91□□□□□ -0.18
CTSA-219ENST00000607841 POLG2Q9UHN1 485 aa13.91□□□□□ -0.18
CTSA-219ENST00000607841 TRMT6Q9UJA5 497 aaKnown RBP13.91□□□□□ -0.18
CTSA-219ENST00000607841 CDYLQ9Y232 598 aa13.91□□□□□ -0.18
CTSA-219ENST00000607841 DHRS7Q9Y394 339 aa13.91□□□□□ -0.18
CTSA-219ENST00000607841 SPTBN2O15020 2390 aa13.9□□□□□ -0.18
CTSA-219ENST00000607841 MED19A0JLT2 244 aaPredicted RBP13.9□□□□□ -0.18
CTSA-219ENST00000607841 D6RAR5 112 aa13.9□□□□□ -0.18
CTSA-219ENST00000607841 UBXN7O94888 489 aa13.9□□□□□ -0.18
CTSA-219ENST00000607841 F7P08709 466 aaPredicted RBP13.9□□□□□ -0.18
CTSA-219ENST00000607841 CBSLP0DN79 551 aa13.9□□□□□ -0.18
CTSA-219ENST00000607841 ENO3P13929 434 aaPredicted RBP13.9□□□□□ -0.18
CTSA-219ENST00000607841 CD9P21926 228 aa13.9□□□□□ -0.18
CTSA-219ENST00000607841 CBSP35520 551 aa13.9□□□□□ -0.18
CTSA-219ENST00000607841 MAPK9P45984 424 aa13.9□□□□□ -0.18
CTSA-219ENST00000607841 LRRC8EQ6NSJ5 796 aa13.9□□□□□ -0.18
CTSA-219ENST00000607841 DUS1LQ6P1R4 473 aaKnown RBP13.9□□□□□ -0.18
CTSA-219ENST00000607841 WDR74Q6RFH5 385 aaPredicted RBP13.9□□□□□ -0.18
CTSA-219ENST00000607841 UNC5DQ6UXZ4 953 aa13.9□□□□□ -0.18
CTSA-219ENST00000607841 USP53Q70EK8 1073 aa13.9□□□□□ -0.18
CTSA-219ENST00000607841 GPATCH11Q8N954 259 aa13.9□□□□□ -0.18
CTSA-219ENST00000607841 SIDT2Q8NBJ9 832 aaKnown RBP13.9□□□□□ -0.18
CTSA-219ENST00000607841 OR5K2Q8NHB8 316 aa13.9□□□□□ -0.18
CTSA-219ENST00000607841 NDNQ99608 321 aa13.9□□□□□ -0.18
CTSA-219ENST00000607841 GPR21Q99679 349 aa13.9□□□□□ -0.18
CTSA-219ENST00000607841 CDC42EP4Q9H3Q1 356 aaKnown RBP13.9□□□□□ -0.18
CTSA-219ENST00000607841 RHOJQ9H4E5 214 aa13.9□□□□□ -0.18
CTSA-219ENST00000607841 NINJ2Q9NZG7 142 aa13.9□□□□□ -0.18
CTSA-219ENST00000607841 SLC17A6Q9P2U8 582 aa13.9□□□□□ -0.18
CTSA-219ENST00000607841 SLC24A2Q9UI40 661 aa13.9□□□□□ -0.18
CTSA-219ENST00000607841 VWA7Q9Y334 891 aa13.9□□□□□ -0.18
CTSA-219ENST00000607841 NEUROG3Q9Y4Z2 214 aa13.9□□□□□ -0.18
CTSA-219ENST00000607841 PRAMEF33A0A0G2JMD5 474 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 FAM221BA6H8Z2 402 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 EIF3FO00303 357 aaPredicted RBP13.89□□□□□ -0.19
CTSA-219ENST00000607841 CSO75390 466 aaKnown RBP13.89□□□□□ -0.19
CTSA-219ENST00000607841 PROS1P07225 676 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 TNFRSF8P28908 595 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 GP5P40197 560 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 RGS4P49798 205 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 ABRQ12979 859 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 TARDBPQ13148 414 aaKnown RBP eCLIP13.89□□□□□ -0.19
CTSA-219ENST00000607841 GBX1Q14549 363 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 ISXQ2M1V0 245 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 KBTBD12Q3ZCT8 623 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 GRTP1Q5TC63 336 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 HECTD2Q5U5R9 776 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 NKAIN2Q5VXU1 208 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 TMEM71Q6P5X7 295 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 NEK10Q6ZWH5 1172 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 TRMT10CQ7L0Y3 403 aaKnown RBP13.89□□□□□ -0.19
CTSA-219ENST00000607841 ZC3HC1Q86WB0 502 aaKnown RBP13.89□□□□□ -0.19
CTSA-219ENST00000607841 PLXDC1Q8IUK5 500 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 VRK3Q8IV63 474 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 PPM1NQ8N819 430 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 PHC3Q8NDX5 983 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 OR4D9Q8NGE8 314 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 CFAP61Q8NHU2 1237 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 MAGEC3Q8TD91 643 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 LCN9Q8WX39 176 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 NCSTNQ92542 709 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 UBXN4Q92575 508 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 CYTH2Q99418 400 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 SCNM1Q9BWG6 230 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 STRADBQ9C0K7 418 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 TFB2MQ9H5Q4 396 aaKnown RBP13.89□□□□□ -0.19
CTSA-219ENST00000607841 RDH14Q9HBH5 336 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 SMYD2Q9NRG4 433 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 GALPQ9UBC7 116 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 ANGPTL2Q9UKU9 493 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 ATXN7L1Q9ULK2 861 aaPredicted RBP13.89□□□□□ -0.19
CTSA-219ENST00000607841 WASF3Q9UPY6 502 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 MED16Q9Y2X0 877 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 PSAT1Q9Y617 370 aa13.89□□□□□ -0.19
CTSA-219ENST00000607841 CXorf49A8MYA2 514 aaPredicted RBP13.88□□□□□ -0.19
CTSA-219ENST00000607841 ACSL3O95573 720 aa13.88□□□□□ -0.19
CTSA-219ENST00000607841 TYRP1P17643 537 aa13.88□□□□□ -0.19
CTSA-219ENST00000607841 MCM3P25205 808 aa13.88□□□□□ -0.19
CTSA-219ENST00000607841 SPRP35270 261 aaPredicted RBP13.88□□□□□ -0.19
CTSA-219ENST00000607841 CCNFP41002 786 aa13.88□□□□□ -0.19
CTSA-219ENST00000607841 ABCG1P45844 678 aa13.88□□□□□ -0.19
CTSA-219ENST00000607841 CAPZBP47756 277 aa13.88□□□□□ -0.19
CTSA-219ENST00000607841 SLC12A2P55011 1212 aa13.88□□□□□ -0.19
CTSA-219ENST00000607841 INHBCP55103 352 aa13.88□□□□□ -0.19
CTSA-219ENST00000607841 SHC2P98077 582 aa13.88□□□□□ -0.19
CTSA-219ENST00000607841 PRKG2Q13237 762 aa13.88□□□□□ -0.19
CTSA-219ENST00000607841 PDAP1Q13442 181 aaKnown RBP13.88□□□□□ -0.19
CTSA-219ENST00000607841 KLHL38Q2WGJ6 581 aa13.88□□□□□ -0.19
CTSA-219ENST00000607841 ACSBG2Q5FVE4 666 aa13.88□□□□□ -0.19
CTSA-219ENST00000607841 RBM20Q5T481 1227 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms