RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 GNGT1P63211 74 aa16.13■□□□□ 0.17
PMF1-206ENST00000606952 PHKG1Q16816 387 aa16.13■□□□□ 0.17
PMF1-206ENST00000606952 PLK5Q496M5 336 aa16.13■□□□□ 0.17
PMF1-206ENST00000606952 CAPRIN2Q6IMN6 1127 aaKnown RBP16.13■□□□□ 0.17
PMF1-206ENST00000606952 METTL2BQ6P1Q9 378 aaKnown RBP16.13■□□□□ 0.17
PMF1-206ENST00000606952 CHST15Q7LFX5 561 aaPredicted RBP16.13■□□□□ 0.17
PMF1-206ENST00000606952 UBTD2Q8WUN7 234 aa16.13■□□□□ 0.17
PMF1-206ENST00000606952 SREK1Q8WXA9 508 aaKnown RBP16.13■□□□□ 0.17
PMF1-206ENST00000606952 PAIP2Q9BPZ3 127 aaKnown RBP16.13■□□□□ 0.17
PMF1-206ENST00000606952 ZDHHC5Q9C0B5 715 aa16.13■□□□□ 0.17
PMF1-206ENST00000606952 MANSC1Q9H8J5 431 aa16.13■□□□□ 0.17
PMF1-206ENST00000606952 C11orf16Q9NQ32 467 aa16.13■□□□□ 0.17
PMF1-206ENST00000606952 PDE10AQ9Y233 779 aa16.13■□□□□ 0.17
PMF1-206ENST00000606952 ST14Q9Y5Y6 855 aa16.13■□□□□ 0.17
PMF1-206ENST00000606952 ANKRD12Q6UB98 2062 aa16.12■□□□□ 0.17
PMF1-206ENST00000606952 CACNA1EQ15878 2313 aa16.12■□□□□ 0.17
PMF1-206ENST00000606952 ARHGEF33A8MVX0 844 aa16.12■□□□□ 0.17
PMF1-206ENST00000606952 TLR4O00206 839 aa16.12■□□□□ 0.17
PMF1-206ENST00000606952 HRO43593 1189 aa16.12■□□□□ 0.17
PMF1-206ENST00000606952 SNNO75324 88 aaPredicted RBP16.12■□□□□ 0.17
PMF1-206ENST00000606952 SNUPNO95149 360 aaKnown RBP16.12■□□□□ 0.17
PMF1-206ENST00000606952 TNFP01375 233 aa16.12■□□□□ 0.17
PMF1-206ENST00000606952 RPS17P08708 135 aaKnown RBP16.12■□□□□ 0.17
PMF1-206ENST00000606952 SP9P0CG40 484 aa16.12■□□□□ 0.17
PMF1-206ENST00000606952 CYP2A7P20853 494 aa16.12■□□□□ 0.17
PMF1-206ENST00000606952 BGNP21810 368 aa16.12■□□□□ 0.17
PMF1-206ENST00000606952 BLKP51451 505 aa16.12■□□□□ 0.17
PMF1-206ENST00000606952 ALDH18A1P54886 795 aaKnown RBP16.12■□□□□ 0.17
PMF1-206ENST00000606952 NXPH1P58417 271 aa16.12■□□□□ 0.17
PMF1-206ENST00000606952 PPARDQ03181 441 aa16.12■□□□□ 0.17
PMF1-206ENST00000606952 SETDB1Q15047 1291 aa16.12■□□□□ 0.17
PMF1-206ENST00000606952 LYSMD4Q5XG99 296 aa16.12■□□□□ 0.17
PMF1-206ENST00000606952 ATG16L1Q676U5 607 aa16.12■□□□□ 0.17
PMF1-206ENST00000606952 TTC23LQ6PF05 361 aa16.12■□□□□ 0.17
PMF1-206ENST00000606952 ABRAXAS1Q6UWZ7 409 aa16.12■□□□□ 0.17
PMF1-206ENST00000606952 SPATS2Q86XZ4 545 aaKnown RBP16.12■□□□□ 0.17
PMF1-206ENST00000606952 RGL4Q8IZJ4 473 aa16.12■□□□□ 0.17
PMF1-206ENST00000606952 DEFB119Q8N690 84 aa16.12■□□□□ 0.17
PMF1-206ENST00000606952 GPBAR1Q8TDU6 330 aa16.12■□□□□ 0.17
PMF1-206ENST00000606952 LRRC8CQ8TDW0 803 aa16.12■□□□□ 0.17
PMF1-206ENST00000606952 RMDN2Q96LZ7 410 aa16.12■□□□□ 0.17
PMF1-206ENST00000606952 FOPNLQ96NB1 174 aa16.12■□□□□ 0.17
PMF1-206ENST00000606952 KLC4Q9NSK0 619 aa16.12■□□□□ 0.17
PMF1-206ENST00000606952 NCKIPSDQ9NZQ3 722 aa16.12■□□□□ 0.17
PMF1-206ENST00000606952 ZNF318Q5VUA4 2279 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 A6NCN8 305 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 NEMP2A6NFY4 417 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 PRR5-ARHGAP8B1AHC4 643 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 TMEM114B3SHH9 223 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 BCAT2O15382 392 aaPredicted RBP16.11■□□□□ 0.17
PMF1-206ENST00000606952 NPHS1O60500 1241 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 C1orf105O95561 183 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 CATP04040 527 aaKnown RBP16.11■□□□□ 0.17
PMF1-206ENST00000606952 CSF2P04141 144 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 NME1P15531 152 aaKnown RBP16.11■□□□□ 0.17
PMF1-206ENST00000606952 IMPDH1P20839 514 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 IDSP22304 550 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 MAOBP27338 520 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 HOXD12P35452 270 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 GGT5P36269 586 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 DPP6P42658 865 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 CTBSQ01459 385 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 OCRLQ01968 901 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 GALNT1Q10472 559 aaPredicted RBP16.11■□□□□ 0.17
PMF1-206ENST00000606952 PCBP2Q15366 365 aaKnown RBP eCLIP16.11■□□□□ 0.173e-6■□□□□ 11.2
PMF1-206ENST00000606952 CHI3L2Q15782 390 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 CES4AQ5XG92 561 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 SULT1C3Q6IMI6 304 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 FRA10AC1Q70Z53 315 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 UBE2R2Q712K3 238 aaPredicted RBP16.11■□□□□ 0.17
PMF1-206ENST00000606952 TAX1BP1Q86VP1 789 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 NRROSQ86YC3 692 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 KLHDC8AQ8IYD2 350 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 PHACTR4Q8IZ21 702 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 TCAIMQ8N3R3 496 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 FBXO39Q8N4B4 442 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 MCOLN3Q8TDD5 553 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 TSACCQ96A04 125 aaPredicted RBP16.11■□□□□ 0.17
PMF1-206ENST00000606952 TMEM237Q96Q45 408 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 GATA5Q9BWX5 397 aaPredicted RBP16.11■□□□□ 0.17
PMF1-206ENST00000606952 TRIM54Q9BYV2 358 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 SUSD2Q9UGT4 822 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 HAO1Q9UJM8 370 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 PTBP2Q9UKA9 531 aaKnown RBP16.11■□□□□ 0.17
PMF1-206ENST00000606952 GPSM3Q9Y4H4 160 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 PCDHGA2Q9Y5H1 932 aa16.11■□□□□ 0.17
PMF1-206ENST00000606952 A0A1B0GTW7 788 aa16.1■□□□□ 0.17
PMF1-206ENST00000606952 WDR91A4D1P6 747 aa16.1■□□□□ 0.17
PMF1-206ENST00000606952 SUPT3HB4E1H0 165 aa16.1■□□□□ 0.17
PMF1-206ENST00000606952 MYO1CO00159 1063 aa16.1■□□□□ 0.17
PMF1-206ENST00000606952 SUPT3HO75486 399 aa16.1■□□□□ 0.17
PMF1-206ENST00000606952 SLC34A2O95436 690 aa16.1■□□□□ 0.17
PMF1-206ENST00000606952 SLC35G4P0C7Q5 338 aa16.1■□□□□ 0.17
PMF1-206ENST00000606952 RPIAP49247 311 aa16.1■□□□□ 0.17
PMF1-206ENST00000606952 HNMTP50135 292 aa16.1■□□□□ 0.17
PMF1-206ENST00000606952 AFF3P51826 1226 aaKnown RBP16.1■□□□□ 0.17
PMF1-206ENST00000606952 HERVK_113P63132 956 aa16.1■□□□□ 0.17
PMF1-206ENST00000606952 BST1Q10588 318 aa16.1■□□□□ 0.17
PMF1-206ENST00000606952 ANGPT1Q15389 498 aa16.1■□□□□ 0.17
PMF1-206ENST00000606952 UAP1L1Q3KQV9 507 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms