RNA–Protein interactions for RNA: ENST00000601194.1

PSMC4-205, Transcript of proteasome 26S subunit, ATPase 4, human

TSL 3

Gene PSMC4, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC4-205	ENST00000601194	BMPER	Q8N8U9	685 aa		13.91	□□□□□ -0.18
PSMC4-205	ENST00000601194	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
PSMC4-205	ENST00000601194	ACVR1C	Q8NER5	493 aa		13.91	□□□□□ -0.18
PSMC4-205	ENST00000601194	ASZ1	Q8WWH4	475 aa		13.91	□□□□□ -0.18
PSMC4-205	ENST00000601194	PWWP2A	Q96N64	755 aa		13.91	□□□□□ -0.18
PSMC4-205	ENST00000601194	FERD3L	Q96RJ6	166 aa		13.91	□□□□□ -0.18
PSMC4-205	ENST00000601194	WDR83	Q9BRX9	315 aa	Known RBP	13.91	□□□□□ -0.18
PSMC4-205	ENST00000601194	NAT9	Q9BTE0	207 aa		13.91	□□□□□ -0.18
PSMC4-205	ENST00000601194	MVB12B	Q9H7P6	319 aa		13.91	□□□□□ -0.18
PSMC4-205	ENST00000601194	PLAC1	Q9HBJ0	212 aa		13.91	□□□□□ -0.18
PSMC4-205	ENST00000601194	C20orf96	Q9NUD7	363 aa	Predicted RBP	13.91	□□□□□ -0.18
PSMC4-205	ENST00000601194	INTS10	Q9NVR2	710 aa	Known RBP	13.91	□□□□□ -0.18
PSMC4-205	ENST00000601194	FAM169A	Q9Y6X4	670 aa		13.91	□□□□□ -0.18
PSMC4-205	ENST00000601194	OR5K3	A6NET4	321 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	PFDN6	O15212	129 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	NVL	O15381	856 aa	Known RBP	13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	TOX3	O15405	576 aa	Predicted RBP	13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	RAD51C	O43502	376 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	KIF1C	O43896	1103 aa	Known RBP	13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	GPC4	O75487	556 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	SLCO2B1	O94956	709 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	TTC4	O95801	387 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	S1PR4	O95977	384 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	ESR1	P03372	595 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	APOA4	P06727	396 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	FMO4	P31512	558 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	SLC5A2	P31639	672 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	MAPK10	P53779	464 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	CSE1L	P55060	971 aa	Known RBP	13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	HSPA14	Q0VDF9	509 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	THOC5	Q13769	683 aa	Known RBP	13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	HIF1A	Q16665	826 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	ZNF789	Q5FWF6	425 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	IRGC	Q6NXR0	463 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	MAATS1	Q7Z4T9	603 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	PRSS42	Q7Z5A4	293 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	DENND6A	Q8IWF6	608 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	UNC5B	Q8IZJ1	945 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	ZNF248	Q8NDW4	579 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	PHC3	Q8NDX5	983 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	ZDHHC12	Q96GR4	267 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	DCBLD2	Q96PD2	775 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	PANX3	Q96QZ0	392 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	ERP44	Q9BS26	406 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	HGH1	Q9BTY7	390 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	B3GNT4	Q9C0J1	378 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	OCIAD1	Q9NX40	245 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	CDC23	Q9UJX2	597 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	ACSL6	Q9UKU0	697 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	ASF1A	Q9Y294	204 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	VPS9D1	Q9Y2B5	631 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	CRYL1	Q9Y2S2	319 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	SNX24	Q9Y343	169 aa		13.9	□□□□□ -0.18
PSMC4-205	ENST00000601194	OR6C74	A6NCV1	312 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	EFCAB7	A8K855	629 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194		B4E171	279 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	C9orf172	C9J069	976 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194		H3BMM5	538 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	PRAMEF10	O60809	474 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	NIPSNAP2	O75323	286 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	F7	P08709	466 aa	Predicted RBP	13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	TSPAN7	P41732	249 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	SLC1A2	P43004	574 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	ARL4C	P56559	192 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	CTBP1	Q13363	440 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	TMED2	Q15363	201 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	HSP90AA5P	Q58FG0	334 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	SPANXN3	Q5MJ09	141 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	FAM92B	Q6ZTR7	304 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	KCNMB4	Q86W47	210 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	OOSP2	Q86WS3	158 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	FAM129C	Q86XR2	697 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	LMNTD2	Q8IXW0	634 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	OR52E1	Q8NGJ3	308 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	OR5AR1	Q8NGP9	310 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	CALML6	Q8TD86	181 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	LCN9	Q8WX39	176 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	USP7	Q93009	1102 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	ART4	Q93070	314 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	PMEPA1	Q969W9	287 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	LRRC39	Q96DD0	335 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	NRTN	Q99748	197 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	FAM167B	Q9BTA0	163 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	ZNF768	Q9H5H4	540 aa	Known RBP	13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	TFB2M	Q9H5Q4	396 aa	Known RBP	13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	HRASLS2	Q9NWW9	162 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	SIDT1	Q9NXL6	827 aa	Known RBP	13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	FOXJ2	Q9P0K8	574 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	SEMA5B	Q9P283	1151 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	PCDHGA3	Q9Y5H0	932 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	TEX264	Q9Y6I9	313 aa		13.89	□□□□□ -0.19
PSMC4-205	ENST00000601194	NDC80	O14777	642 aa		13.88	□□□□□ -0.19
PSMC4-205	ENST00000601194	KPNA5	O15131	536 aa		13.88	□□□□□ -0.19
PSMC4-205	ENST00000601194	RRP8	O43159	456 aa	Known RBP	13.88	□□□□□ -0.19
PSMC4-205	ENST00000601194	RASSF9	O75901	435 aa		13.88	□□□□□ -0.19
PSMC4-205	ENST00000601194	URI1	O94763	535 aa	Predicted RBP	13.88	□□□□□ -0.19
PSMC4-205	ENST00000601194	ERVK-10	P10266	1014 aa		13.88	□□□□□ -0.19
PSMC4-205	ENST00000601194	PKM	P14618	531 aa	Known RBP	13.88	□□□□□ -0.19
PSMC4-205	ENST00000601194	ELK3	P41970	407 aa		13.88	□□□□□ -0.19
PSMC4-205	ENST00000601194	MC2R	Q01718	297 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms